Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1611 ATGAATCCACCACCACCACCACCACCAACCTCCTCCGACCACCTGAACACAACACTCTCATCCCTCACCAACCTCCTCACTTTCTCAACTCAAATCCTCTCAATCACCACCCAACCCCAAACCCTAACCACCAATTTCATCCCCTGCCCTTTCAATCCCAACCACCTCATGCCCCCATCTTCCCTTTTCCTCCACCACCTCCGCTGCCCATCCTCCCCTAACCCCCTTCCCCACCTCAACCACCTCCTCACCTCTCTCTCTTACCCTAAAACCCTCCAAAACCCTAACTCCATTCACCTCTCTTCTTACTTTGATTTCACTTCCAATTTTTTCTACAACGATTGCCCTGGCGTCGTTACTTTCTCCGACGCAACCTCCGTCGCTAATTCCGCAACTTTTCATCTCCCTGATTTTCTATCAATAGAATGTTCAGACAACAATACCACACTCAATCATAATCCCAAACCTTCCCCCATTGTTCCTTCTGAGTATTTTTACATTTCACGTGAAATTGAATCATGGAACAATTTTCCTATTACGTTTTCGAACTCTGTTTTTCGTGCAATCCTAGGTATTGGAATTGCGAAAGAGAGTGAAATGGCGAACTGGTTGTTATCGAATTCGCCTCAATTTGGTGTTGTAATTGATACTTCTATGCAGTGTCATATTTTTTTGCTGTTTTGTTTGTGTTTTAAGGCAATTCTTAGAGATGTTTCTGTTTTGAATAATGCTTTAGTATGGTTAGAATCTCAGGTTTCGATTTTGTATGGTGTTAATGGGAAATTGTTTGTTCTTAATTTTGTGAAAAAATGTATTCTTGTTGGTGCTTCGGTTCTGTTATTGTTTCCTTTAGAGAATGAGGTTGGTGATTCTGTTGATTCAAAGAAAGAGAAGAATAATACCACAGATTGTATTCGGGAGAAGAAGATTTTAATGCCGCAAGTTGTAGCGGGTGTTGCGGCGTTGCATGAACGAGCATTGCTTGAACGTAAATTTAAGGGATTTTGGTTTCCGCATCCATCAAATAACTATCAGCTGAAAGCTGAGCATTGTTATTTATCTGACAAAGCTAACGAAGAGCGGAATAAGCGTGTTGATTATAGACCTATAATTGAGTATGATTGGGTTCATCGGCAGCATTCACATAACCAGGGAACACAAAAAGAGAAGACACGAGAGGAGTTACTAGCTGAAGAAAGGGATTATAAACGTCGAAGAATGTCTTATCGTGGCAAGAAGAGAAATCAATCAACTATACAGGTGATGAGGGATCTGATAACGGAATACATGGAGGAAATCAATCTGGCTGCAGGTGTAAAGAGCCCCGTCAGTGTTTCTGAAGACAATAAAATGCCTCCTCCTAAACTTCCTTCTAGTCACGCCATTCCCATGGAAGCCGATAATTCAGGAAAAGCTAGTCATGACTCACCTGCAGTGACAATCAGTAACCCAGGTTATCATGAGCAACAATCTCACACAAATTATTCTGACAAAAGCGAAGCTGTACATGATGCTACTTCTAGAGATTATGAACAACATAAACAAGGACATCACAAGAGCCACCATTACAGAGAAGATCAACGGAGTGCTGATCAAGGAAATCATAGGAGTCGTACTTCAACAAGCCCTGAAAGACATAGAAATCGTGCTTCAACAAGCTCTGAAAGACATAGAAGTCATAGTCGATCACATGATCGTAGAGTTCATCATAAGAAACAAGATTACTCAAATGAAAACAAGTACAATAACTCGTCAAGAACCAAGGATAGGGACCAAAATGTATTTTCAGAGCGCTATGATCCTTCGGAGTATCATGATGTTAGGGAGCATGATAGCTCCCCTGATGACAAATATATCAAGCCAGATAAATTTTATCCTAAGGAACTTAATTAG 1893 0.411 MNPPPPPPPTSSDHLNTTLSSLTNLLTFSTQILSITTQPQTLTTNFIPCPFNPNHLMPPSSLFLHHLRCPSSPNPLPHLNHLLTSLSYPKTLQNPNSIHLSSYFDFTSNFFYNDCPGVVTFSDATSVANSATFHLPDFLSIECSDNNTTLNHNPKPSPIVPSEYFYISREIESWNNFPITFSNSVFRAILGIGIAKESEMANWLLSNSPQFGVVIDTSMQCHIFLLFCLCFKAILRDVSVLNNALVWLESQVSILYGVNGKLFVLNFVKKCILVGASVLLLFPLENEVGDSVDSKKEKNNTTDCIREKKILMPQVVAGVAALHERALLERKFKGFWFPHPSNNYQLKAEHCYLSDKANEERNKRVDYRPIIEYDWVHRQHSHNQGTQKEKTREELLAEERDYKRRRMSYRGKKRNQSTIQVMRDLITEYMEEINLAAGVKSPVSVSEDNKMPPPKLPSSHAIPMEADNSGKASHDSPAVTISNPGYHEQQSHTNYSDKSEAVHDATSRDYEQHKQGHHKSHHYREDQRSADQGNHRSRTSTSPERHRNRASTSSERHRSHSRSHDRRVHHKKQDYSNENKYNNSSRTKDRDQNVFSERYDPSEYHDVREHDSSPDDKYIKPDKFYPKELN* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1611 630 ProSiteProfiles Zinc finger CHHC U11-48K-type profile. 46 73 IPR022776 -
Tpr1g1611 630 MobiDBLite consensus disorder prediction 493 559 - -
Tpr1g1611 630 MobiDBLite consensus disorder prediction 486 630 - -
Tpr1g1611 630 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN 1 603 IPR032845 -
Tpr1g1611 630 PANTHER UNCHARACTERIZED 1 603 - -
Tpr1g1611 630 Pfam U11-48K-like CHHC zinc finger 46 70 IPR022776 -
Tpr1g1611 630 MobiDBLite consensus disorder prediction 570 630 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1611 K13156 - gmx:100803944 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1611 1 15107369 15113174 Tpr1g1611 1 15107369 15113174 ECH