Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1603 ATGCATTCATGTTACAGTTACAGTTACAGTTACAGTTACAACTACATTCCGTTCAAATTAAACCGTTTAACTCCCCGAACCGTACCGGTTCGAGCAACAGTTACTTCATCGGAAAAGCGGTCCAGAAAGAAGAAACCGGCGAAAGATGACGAACGTTCGCTCGAGAACAGTCTCCGGTTCAGTTTCATGGAGGAACTCATGAACCGAGCTAAGAACCGTGACTCAACCGGTGTTTCTCAAATTATGTATGATATGATTGCCGCTGGTTTGAATCCCGGTCCAAGATCGTTTCACGGTTTGGTAGTTTCGTATGCTCTTAACGGTGATGAACAAGCCGCGATGGATTCGCTGAGGAGAGAGTTAGGTGCAGGGCTTCGGCCGATTCATGAAACTTTCGTTACATTGGTAAGATTGTTTGGGTCTAAAGGCCATGCTACTAAAGGTTTAGAGATACTCGGAGCTATGGAAAAGCTAAATTATGATATTCGTCATGCTTGGCTAATTCTTATTGAGGAACTTGTTCGGAATAAGCATTTGGAAGATGCAAACAAAGTGTTCTTGAAGGGCTCTAAGGGGGGCCTCAGGGCTACTGATGAAGTTTATGATCTTCTAATTGTGGAAGACTGCAAAGCGGGAGACCATTCTAATGCTTTAGAAATTTCCTATGAGATGGAAGCTGCTGGACGAATGGCAACAACGTTCCATTTTAATTGCCTCCTCTCTGTGCAGGCTACCTGCGGAATACCTGAAATAGCCTTTACAACATTTGAGAACATGGAATATGGAGAAGATTATATGAAGCCTGATACAGAAACATACAATTGGGTCATTCAAGCGTATACTAGAGCTGATTCTTACGACAGAATGCAAGATGTTGCTGAGTTGCTTGGCATGATGGTTGAAGATCATAAGCGCATACAGCCAAATGTGAAGACCCATGCGTTGTTAGTTGAGTGTTTTACCAAGTACTGTGTAGTACGAGAAGCTATCAGGCATTTCCGAGCACTTAAAAACTTCGAAGGGGGTACACAAGTTCTACATAATGAAGGGAACTATGGAGATCCTCTTTCTTTGTACCTTCGGGCATTGTGTCGGGAAGGAAGGATTACTGACATGCTTGAAGCTTTAGAAGCTATGGACAAAGATAACATGCAAATCCCCTCGCGGGCAATGATCTTGAGCAGAAAATACCGGACATTAGTGAGCTCATGGATTGAACCTTTACAAGAGGAGGCTGGACTTGGTTATGAGATTGATTATATTGCCAGATATGTTGAAGAAGGTGGCCTTACTGGAGAGCGCAAACGGTGGGTGCCTCGAGGTGGTAAAACACCTCTAGATCCTGATGTTGAAGGATTTATATTTTCAAACCCAATTGAAACCTCCTTCAAACAAAGATGCCTTGAGGAGAGGAAGTTGTACCATAGGAAGCTTCTGAAGAAGTTGCAGTATGAAGGAATTGTAGCTTTAGGTGATGGTGTATCTGAATCTGATTATGTTAGAGTGCTCGAGTGGCTAAAGAAAATCATAAAGGGGCCTGAACAGAATGCTTTAAAACCTAAGGCTGCTAGTAAAATGCTTGTGAATGAATTGAAGGAAGAACTAGAAGCACAAGGTTTGCCTACTGATGGAAACAGAAGTGTTCTTTACCAGCGTGTTCAGAAAGCACGGAGAATAAATCAATCGCGTGGTCGGCCGCTTTGGGTTCCTCCCATTGAAGAGGAGGAAGAAGAGGTGGATGAAGAGCTGGATGCGTTGATTTCACGCATAAAGCTGGAGGAAGGAAATACAGAGTATTGGAAACGTCGCTTCTTAGGAGAAGGTTTAAATGCATTGGTTGAAGGTAAATCAGAGTCCCCTGATGTTCAAGATTATATTGATGTTGGAGAGGATGATGCAAAAGAGGCTGTAGATGATGATGATGATGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAAGTAGAACAGGCAGAAGAGGAAGTTGAAGAACCAGTAGTAAGCCAAGATGTAGAGAAGATAAAGGAAAAGGAAAAGGAAGTTGAAGGGGAAAAGTCCCTTCAAATGATTGGAATCCAGTTGTTGAAAGATTCTGACCAACCCCCTACCACTTCTAAAAGGTTTAGAAGGAGAAGAACATATGAGGATGATGTCGACGATGATTGGTTTCCTTTGGATATATTTGAGGCATTTAAGGAAATGAGGAATCGAGGATTTTTTGATGTGTCAGACATGTATACCTTAGCAGATGCTTGGGGATGGACATGGGAGAGAGAACTGAAGAACAAACAGCCTCATAGATGGTCACAGGAATGGGAAGTCGAGCTGGCAATCAAAGTTATGCAGAAGGTCATAAAATTAGGAGGTACACCAACTATTGGAGATTGTGCCATGATCTTGCGTGCAGCTATAAGAGCACCTCTACCTTCAGCTTTCTTGACAATTTTGCAGACAACTCATAGTCTTGGTTATAAGTTTGGGAGACCGCTATATGAAGAGGTTATCTCTCTCTGCCTTGATCTTGGGGAACTAGATGCAGCTGTTGCTGTTGTGGCAGACTTGGAGACCACGGGGATCACGGTTTCAGACCAGACTCTGGACAGGGTGATTTCTGGTAAATAG 2625 0.4316 MHSCYSYSYSYSYNYIPFKLNRLTPRTVPVRATVTSSEKRSRKKKPAKDDERSLENSLRFSFMEELMNRAKNRDSTGVSQIMYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPIHETFVTLVRLFGSKGHATKGLEILGAMEKLNYDIRHAWLILIEELVRNKHLEDANKVFLKGSKGGLRATDEVYDLLIVEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFTTFENMEYGEDYMKPDTETYNWVIQAYTRADSYDRMQDVAELLGMMVEDHKRIQPNVKTHALLVECFTKYCVVREAIRHFRALKNFEGGTQVLHNEGNYGDPLSLYLRALCREGRITDMLEALEAMDKDNMQIPSRAMILSRKYRTLVSSWIEPLQEEAGLGYEIDYIARYVEEGGLTGERKRWVPRGGKTPLDPDVEGFIFSNPIETSFKQRCLEERKLYHRKLLKKLQYEGIVALGDGVSESDYVRVLEWLKKIIKGPEQNALKPKAASKMLVNELKEELEAQGLPTDGNRSVLYQRVQKARRINQSRGRPLWVPPIEEEEEEVDEELDALISRIKLEEGNTEYWKRRFLGEGLNALVEGKSESPDVQDYIDVGEDDAKEAVDDDDDDDDDDEEEEEEEEVEQAEEEVEEPVVSQDVEKIKEKEKEVEGEKSLQMIGIQLLKDSDQPPTTSKRFRRRRTYEDDVDDDWFPLDIFEAFKEMRNRGFFDVSDMYTLADAWGWTWERELKNKQPHRWSQEWEVELAIKVMQKVIKLGGTPTIGDCAMILRAAIRAPLPSAFLTILQTTHSLGYKFGRPLYEEVISLCLDLGELDAAVAVVADLETTGITVSDQTLDRVISGK* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1603 874 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE 3 27 806 - -
Tpr1g1603 874 SMART sap_9 523 557 IPR003034 -
Tpr1g1603 874 ProSiteProfiles SAP motif profile. 523 557 IPR003034 -
Tpr1g1603 874 Coils Coil 642 662 - -
Tpr1g1603 874 SUPERFAMILY SAP domain 523 560 IPR036361 -
Tpr1g1603 874 MobiDBLite consensus disorder prediction 36 53 - -
Tpr1g1603 874 MobiDBLite consensus disorder prediction 630 683 - -
Tpr1g1603 874 Pfam SAP domain 524 556 IPR003034 -
Tpr1g1603 874 MobiDBLite consensus disorder prediction 31 53 - -
Tpr1g1603 874 MobiDBLite consensus disorder prediction 631 667 - -
Tpr1g1603 874 MobiDBLite consensus disorder prediction 668 683 - -
Tpr1g1603 874 Gene3D Tetratricopeptide repeat domain 60 206 IPR011990 GO:0005515
Tpr1g1603 874 Gene3D Tetratricopeptide repeat domain 725 873 IPR011990 GO:0005515
Tpr1g1603 874 Gene3D Tetratricopeptide repeat domain 207 443 IPR011990 GO:0005515
Tpr1g1603 874 Gene3D SAP domain 511 566 IPR036361 -
Tpr1g1603 874 PANTHER - 27 806 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1603 70 325 Glycosyltransferase AT1G05670 23.346 1.18e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1603 - - ccaj:109815736 1349.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1603 1 15013456 15026283 Tpr1g1603 1 15013456 15026283 ECH