Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1599 ATGAAAGATATGGATATTGTTGGGAGAAAAAGAAGGTTTCTCTGTTCTACTCTGCATTTTCCTCTTCTGATTTTCTTCATGGCAATACTTCTACAAAGGAGTAGTATTATTGTGGCTGAATCAAACATGTTAAATTACACAAAGTATAGACAAATTAGTAGTTTGAGGCTTGAAAGGATTAATAATCACTTGGACAAGATTAACAAGGCTCCTGTTCTCACCATTGAGAGCCCAGATGGAGATCTTATTGATTGTGTTCATAAAAGAAAACAATTAGCTTTGGATCACCCACTTTTAAAGAATCACAAGATCCAGAAAGCGCCGAGTGAGATGCCAAGATGGATGAAAGTGAAGAGAGATGACAACGGCGGTAGTAAAGACACAAATGCTAGTGATATGAAGGGGGGAGAAGGGAGGGTAAGAGAAGACTCGTGGCAAATGTGGCATCGAAATGGGACAAGGTGTCCAAAGGGAACGGTTCCGATACGTAGGAGTACCGTGCATGATGTTTTGAGAGCGAAATCTTTGTATGACTATGGTAAGAAACGGCAACAAATTCCACTATCTCGCCACAGTGAGGCCCCTGATGTACTTTCGGGCAATGGTCACGAGCATGCGATCGCATACACAGGATCGTCGCAAGAGATATACGGTGCAAAAGCATCAATAAGCGTGTGGGATCCGTCTATTGAAGTGATGAACGAGTTCAGTCTCTCGCAAATTTGGGTTCTTTCGGGATCTTTCGATGGTCCTGATCTTAATAGCATCGAAGCTGGATGGCAGGTCAGTCCGGAGCTTTATGGTGATAGCAGACCCAGATTATTCACTTATTGGACGAGTGACTCTTATCAAGCAACAGGATGTTACAATCTTCTTTGTGCTGGATTCATTCAAACAAATAACAAGATAGCTATTGGAGCTGCCATTTCTCCTGTCTCTTCCTATGCTGGCAGCCAATATGACATTTCAATCCTCATTTGGAAGGATCCAAGAGTAGGAAATTGGTGGATGAGTTATGGCGACAACACATTGGTAGGGTATTGGCCAGCGGAGCTATTCACACACTTAGCCGATCACGCCACAATGGTGGAATGGGGCGGGGAGGTAGTAAACTCGCGGTCCAACGGCCGGCACACCTCCACCCAGATGGGTTCCGGCCACTTTGCCGAAGATGGTTTCGGGAAAGCAAGCTACTTTCGGAACCTCGAGATTGTAGACATTGATAACACTCTTAGCTCAGTACAAAGCATCTCAACCTTAGCTGAAAACAAAAATTGTTATGATATTGAAAACTCCTATAGCAATGAATGGGGTACATATTTTTATTATGGTGGGCCTGGGAATAATCCTCAGTGTCCATGA 1362 0.4361 MKDMDIVGRKRRFLCSTLHFPLLIFFMAILLQRSSIIVAESNMLNYTKYRQISSLRLERINNHLDKINKAPVLTIESPDGDLIDCVHKRKQLALDHPLLKNHKIQKAPSEMPRWMKVKRDDNGGSKDTNASDMKGGEGRVREDSWQMWHRNGTRCPKGTVPIRRSTVHDVLRAKSLYDYGKKRQQIPLSRHSEAPDVLSGNGHEHAIAYTGSSQEIYGAKASISVWDPSIEVMNEFSLSQIWVLSGSFDGPDLNSIEAGWQVSPELYGDSRPRLFTYWTSDSYQATGCYNLLCAGFIQTNNKIAIGAAISPVSSYAGSQYDISILIWKDPRVGNWWMSYGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRSNGRHTSTQMGSGHFAEDGFGKASYFRNLEIVDIDNTLSSVQSISTLAENKNCYDIENSYSNEWGTYFYYGGPGNNPQCP* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1599 453 Pfam Neprosin activation peptide 74 209 IPR025521 -
Tpr1g1599 453 MobiDBLite consensus disorder prediction 119 139 - -
Tpr1g1599 453 Pfam Neprosin 234 446 IPR004314 -
Tpr1g1599 453 Gene3D - 228 345 - -
Tpr1g1599 453 PANTHER CARBOXYL-TERMINAL PEPTIDASE 21 451 - -
Tpr1g1599 453 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 21 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1599 Tpr-Chr1 14923337 14928141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1599 - - gmx:100808774 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1599 1 14923337 14928141 Tpr1g1599 1 14923337 14928141 ECH