Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1563 ATGGCTAACCACGATATGATATTTGGTGAAAGTCTCAATTTGGAACATGATCATGAACAGCAATCCGCGCTTGATCATAATCATAATTTGGGCCACGGTGAAAACCATGCATTGAAATTGGGACCAGTCCATGTGCATCATTTGGGCTTGGGAGAAACCCATGATTATGAACTGCCCATGGAACCCATCGATGAACATGAATTCAGGTTGGCACAAAAGCATGATCAAGAAGGTGATGATGGTCGAACTTATGAGCATGACCATAAGCCAGCAATGGATAAAAAACCTGAACATGATATTGACCATGACGAGTTGTCCCTTCCTGGACAAAACCACGAGTCGGTCCTGTCGGAGAACAATGATCTGACTGTTTCGGGAAGCCAAGGACTTGATGAGAGCATGAACCCGACTATGGTTCAGAACCCAGAAATGAGCATTGGTTCTGCCAATGATATGGTTGTTTATCAGTCACAGTATATAGTTTCTTCTACACCCCATGTAATTCAATCTCGTAAAGTTGATGTAAATCCAACTTATGAATTGTTGGTGGGCCAAGAATTTCCGGATGTCAAGAGTTGCCGTAGAGCATTGAGGGATACAGCAATTGCTCTACACTTTGAGATGCAGACAATAAAATCAGACAAGACACGCTTTACTGCTAAATGTGCTAGTGAAGGATGTCCTTGGCGCATTCATGCAGCAAAGCTCCCAGGTGTACCGACTTTTACCATCAGGACAATTCATGAGAGTCATACATGTGGAGGAATTTCTCATCTTGGTCATCAGCAAGCTTCAGTTCAGTGGGTTGCTAGCTCTGTGGAGCAAACGCTGAAGGAGAACCCTAATTGCAAACCAAAGGAGATATTGGAAGAGATTCATAGGGTTCATGGTATCACCTTATCGTACAAGCAAGCATGGAGAGGCAAGGAGCGTATTATGGCTGCAATGCGTGGATCTTTTGAAGAAGAGTATCGCTTGCTTCCACAATACTGTGCACAGGTGAAACGCACAAACCCAGGCAGTATTGCATCTGTTTATGGAAATCCATCTGATAATTGCTTTCAACGCCTATTTATTTCTTTTCAAGCATCTATTTATGGATTTTTAAATGCTTGTCGGCCACTCTTGGGGCTTGATAGAACATATCTGAAGAGCAAGTATCTTGGTACATTGCTTCTTGCAACTGGATTTGATGGTGATGGGGCTGTCTTTCCTCTTGCATTTGGTGTTGTTGATGAGGAGAGTGATGATAATTGGATGTGGTTTCTCTCTGAACTTCATAACCTGCTTGAGATTAATACTGAAAACATGCCAAGGCTTACTATTTTGTCTGATAGACAGCAGGGAATTGTGGATGGCGTTGATGCGAATTTTCCTACTGCTTTCCATGGTTTTTGTATGTGCCACTTGAGTGACAGCTTCCGTAAGGAATTTAATAACACCATGCTGGTCAATCTTCTATGGGAAGCAGCCAATGCTCTTACTATAATTGAATTTGAAACTAAAGTTTTGGAAATTGAAGGGATATCACAAGATGCTGCATATTGGATTCAAAGAGTTCCACCACGTCTGTGGGCTACTGCTTATTTTGAAGGGCAAAGGTTTGGTCATTCAACAGCTAACATAGTTGAAGCTTTGAACAGTTGGATATTAGAGGCATCTGGGCTACCAATAATTCAAATGACGGAATGCATTAGAAGGCAGCTAATGACTTGGTTCAATGATCGGCGAGAAACCAGTTTACAGTGGTCATCCATACTTGTTCCTTCTGCTGAGAGGCGTGTTGCAGAGGCCCTTGAATGTGCACGCACTTATCAGGTTCTTCGTGCCAACGAAGCTGAGTTTGAAGTTATATCTCCCGAGGGAACCAATATAGTTGATATAAGGAATCGCTGCTGTCTTTGTCGTGGTTGGCAGCTTTATGGCTTACCCTGTGCACATGCTGTGGCAGCACTTCTATCCTGCAGGCAGAATGTTCATAGATTCACAGAAAGCTGTTTCACTGTTGCAACTTATCGCAAGACATACTCACAAAGCATACATCCAATTCCTGACAAATCTGTCTGGAAGGAGTTGTCTGAGGGAGATGCCAATGTTAGCCAAGTTCATGAAGTTGTCATTAACCCTCCTAAATCACTCAGACCACCTGGACGGCCAAGAAAGAAGAGAGTTCGTGCAGAAGATCGCGGGCGTGTTAAGCGATTGGTGCATTGTAGTCGCTGCAATCAAACAGGTCACTTTAGAACCACATGTGCTGCCCCCATCTAA 2268 0.4325 MANHDMIFGESLNLEHDHEQQSALDHNHNLGHGENHALKLGPVHVHHLGLGETHDYELPMEPIDEHEFRLAQKHDQEGDDGRTYEHDHKPAMDKKPEHDIDHDELSLPGQNHESVLSENNDLTVSGSQGLDESMNPTMVQNPEMSIGSANDMVVYQSQYIVSSTPHVIQSRKVDVNPTYELLVGQEFPDVKSCRRALRDTAIALHFEMQTIKSDKTRFTAKCASEGCPWRIHAAKLPGVPTFTIRTIHESHTCGGISHLGHQQASVQWVASSVEQTLKENPNCKPKEILEEIHRVHGITLSYKQAWRGKERIMAAMRGSFEEEYRLLPQYCAQVKRTNPGSIASVYGNPSDNCFQRLFISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGAVFPLAFGVVDEESDDNWMWFLSELHNLLEINTENMPRLTILSDRQQGIVDGVDANFPTAFHGFCMCHLSDSFRKEFNNTMLVNLLWEAANALTIIEFETKVLEIEGISQDAAYWIQRVPPRLWATAYFEGQRFGHSTANIVEALNSWILEASGLPIIQMTECIRRQLMTWFNDRRETSLQWSSILVPSAERRVAEALECARTYQVLRANEAEFEVISPEGTNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNVHRFTESCFTVATYRKTYSQSIHPIPDKSVWKELSEGDANVSQVHEVVINPPKSLRPPGRPRKKRVRAEDRGRVKRLVHCSRCNQTGHFRTTCAAPI* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1563 755 ProSiteProfiles Zinc finger SWIM-type profile. 624 656 IPR007527 GO:0008270
Tpr1g1563 755 Pfam MULE transposase domain 376 471 IPR018289 -
Tpr1g1563 755 Pfam SWIM zinc finger 610 655 IPR007527 GO:0008270
Tpr1g1563 755 PANTHER OS12G0597300 PROTEIN 85 754 - -
Tpr1g1563 755 Pfam MuDR family transposase 181 244 IPR004332 -
Tpr1g1563 755 SMART 26again6 631 658 IPR006564 GO:0008270
Tpr1g1563 755 MobiDBLite consensus disorder prediction 74 99 - -
Tpr1g1563 755 PANTHER POLYPROTEIN, PUTATIVE-RELATED 85 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1563 Tpr-Chr1 14469831 14473121 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1563 - - gmx:100811471 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1563 1 14469831 14473121 Tpr1g1563 1 14469831 14473121 ECH