Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1313 ATGCATTCAACAAAATTGATTTTGATTTTTTTAATCTCTTTAACAATATCATCATCATTATCATCATCTACCTTAATCCTACAACAACCAGACTCGGTAACAGCATACGATCTTCTAATGGAATATGGTTTCCCAATGGGTCTTCTTCCAATAGGAGCAATTGGGTATTCGTTAAACAGAGAAACAGGGCAATTTTCTGTGTATTTTGAGAAAACTTGTACTTTTACTATTGAAAGTTATACGCTTAGTTATAAGAGTACTATTTCTGGTGTGATTTCTCAAAATAGGCTTTATAAATTGAAGGGTGTTTCTGTCAAGATTGTGCTTTTGTGGTTGAGTATTGTTGAGGTTTCTCGTAAGGGTAATGATATTGAATTTTCTGTTGGGATTACTGGTGCTAGTTTTGGAGCTGAGAATTTCCTTGAATCTCCTCAGTGTGGTTGTGGCTTTGATTGCAACGATGTTCTTCGGTTAAACGGTGACGTTTCTGATATTTAG 498 0.3494 MHSTKLILIFLISLTISSSLSSSTLILQQPDSVTAYDLLMEYGFPMGLLPIGAIGYSLNRETGQFSVYFEKTCTFTIESYTLSYKSTISGVISQNRLYKLKGVSVKIVLLWLSIVEVSRKGNDIEFSVGITGASFGAENFLESPQCGCGFDCNDVLRLNGDVSDI* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1313 165 Pfam Protein of unknown function, DUF538 35 140 IPR007493 -
Tpr1g1313 165 Gene3D - 17 145 IPR036758 -
Tpr1g1313 165 PANTHER DUF538 FAMILY PROTEIN 13 157 - -
Tpr1g1313 165 SUPERFAMILY At5g01610-like 3 152 IPR036758 -
Tpr1g1313 165 PANTHER T31J12.3 PROTEIN-RELATED 13 157 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1313 Tpr-Chr1 11823666 11824586 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1313 - - mtr:MTR_1g088260 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1313 1 11823666 11824586 Tpr1g1313 1 11823666 11824586 ECH
Tpr6g0513 6 4202465 4206216 Tpr1g1313 1 11823666 11824586 PCT