Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1265 ATGACTGAAATTACTATGAAGAATCAACTTTCACAGCCACACTGGTGGTGGCTTGATGAAAACACCACCGTTAGAAGATCAACATGGCTTCAATCTACAGTCACTGAGCTGAATGAGAAGACAAAGACAATGTTAAAATTAATTGAAGAAGATGCAGATTCCTTCGCGCAACGAGCTGAGATGTTTTACAAGAAGAGACCAGAGCTTGTGAGCATGGTTGAAGATTTCTATAGGAGACACCGCTTGTTAGCTGAACGGTATGATCAAGTCAGACCTGAATCCGGAATTCGCCTGCTCAACCCTCCTGCTTCATGTAAGCATTCTCAATCAGAGAAGTTAACGAGTTTTGATGATGATCGTGGTTATGATAGCTATAGCTATTCTGAGAGTTGTGATGTAGAGGAATCTGTGGAATCTGAAATTGATGATCCTGAGCACGAAGAGGAAGAACATGAGGAAGTTCGGTCTGTGGCTGCAAATGATGTGATGAAGCTGAGGAAGGAAATTGAGATACTTGGTGAAAAGAAGAAGGGTCATAAGGATCAAATCAAGCAAATTCAAAAAGATGACATGCTTGATGTAATGAAGTTGAGGGAAGAAATAGAGCGATCCGAGAAAGAGAATGAAGCACATAAGGATGAACTCAAGCAGGAAATTTCCATTTCTAATGAAGTAGTAATGAAGTTGAGGGAAGAAATAGAACAATTCCAGCAGAAAGATACCATTCACGATCATCAAGTAATGAAGTTGAGGGAAGAGATACAACGACTCAATAAAGAGAATGAAGCACTGAAGGATGAACTCAAGCAGAAAGACACCGTTTCTAATGAAGTAATGAAGTTGAGGGAAAAGATAGAGCGACTCGAGAAAGAGAATGAAGCGCAGAAGAATGAATTCAAGCAGAAAGACACCGTTTCTAATGAAGTAATGAAGTTCAGGGAAAAGATAGAGCGACTCGAGAAAGAAAATGAAGCAAAGAAGGATGAACTCAAGCAGAAAGACACCATTTCTAATGAAGTAATGAAGTTCAGTGAAAAGATAGAACAACTCGAGAAAGAGAATGAAGCACAGAAGGATGAACTGAAGCAGAAAAACACCATTTCTGATGAAGTAATGAAGTTGAAGGAACAAATAGAACAACTCAAGAAAGAGAATGAGGCACAAAAGGATGAACTCAAGCAGAAAGCTACAATTTGCAATGAAGTAATGAAGTTGAGGGAAGAATTAGAAGAAACACACAAGAAAGAGAATGAAGCTCAGAAAGATGAACTCAAGGAGGAAGATACCACCATTTGTGATGAAGTAATGAAGTTGAGGAAAGAGATAGAACGACTCGAGAAAGAGAATGAAGCACAGAATGATGAACTCAAGGAGAAACATATCATTTGCAATGAAGTGCTGAAGTTGAGAGAAGAATTAGAAAGACACAGGGAAGAGAATGAAGCTCGAAAAGATGAACTCATGCATAAACTTACCATTTATGATGAAGTAATGATGTTGAAGGAAGAGAGGGAGAGTTTTAGAGAAGAGAATAGGACACAGAAGGATGATCTGAAACAGAAAGACAAAGAGAAAATAGAGGTAATAAGACAGCTCAGTTCAACAATAGATTTGCTGAAGCAGGAGAATGTAAAGATGAGAAACTTCATAGCTAAGGAATCTGCCAAAAAATGGAAGACACCATTTAAGTTCAACAAACTCATTGGAACATTCTCAGAGAAATTGCTTAATGGGATTCCAAAGACTAAGCCTAGTCTGGTAGCTCTCTAG 1770 0.3859 MTEITMKNQLSQPHWWWLDENTTVRRSTWLQSTVTELNEKTKTMLKLIEEDADSFAQRAEMFYKKRPELVSMVEDFYRRHRLLAERYDQVRPESGIRLLNPPASCKHSQSEKLTSFDDDRGYDSYSYSESCDVEESVESEIDDPEHEEEEHEEVRSVAANDVMKLRKEIEILGEKKKGHKDQIKQIQKDDMLDVMKLREEIERSEKENEAHKDELKQEISISNEVVMKLREEIEQFQQKDTIHDHQVMKLREEIQRLNKENEALKDELKQKDTVSNEVMKLREKIERLEKENEAQKNEFKQKDTVSNEVMKFREKIERLEKENEAKKDELKQKDTISNEVMKFSEKIEQLEKENEAQKDELKQKNTISDEVMKLKEQIEQLKKENEAQKDELKQKATICNEVMKLREELEETHKKENEAQKDELKEEDTTICDEVMKLRKEIERLEKENEAQNDELKEKHIICNEVLKLREELERHREENEARKDELMHKLTIYDEVMMLKEERESFREENRTQKDDLKQKDKEKIEVIRQLSSTIDLLKQENVKMRNFIAKESAKKWKTPFKFNKLIGTFSEKLLNGIPKTKPSLVAL* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1265 589 Coils Coil 497 524 - -
Tpr1g1265 589 Pfam KIP1-like protein 15 88 IPR011684 GO:0003779
Tpr1g1265 589 Coils Coil 194 239 - -
Tpr1g1265 589 PANTHER PROTEIN NETWORKED 4A 439 588 - -
Tpr1g1265 589 PANTHER PROTEIN NETWORKED 4A 12 303 - -
Tpr1g1265 589 Coils Coil 247 427 - -
Tpr1g1265 589 Coils Coil 162 189 - -
Tpr1g1265 589 Coils Coil 435 490 - -
Tpr1g1265 589 PANTHER PROTEIN NETWORKED 3A-RELATED 12 303 - -
Tpr1g1265 589 PANTHER PROTEIN NETWORKED 3A-RELATED 439 588 - -
Tpr1g1265 589 MobiDBLite consensus disorder prediction 127 153 - -
Tpr1g1265 589 MobiDBLite consensus disorder prediction 133 149 - -
Tpr1g1265 589 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 12 94 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1265 Tpr-Chr1 11334964 11339361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1265 - - pvu:PHAVU_007G166300g 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1265 1 11334964 11339361 Tpr1g1265 1 11334964 11339361 ECH
Tpr6g0578 6 4713248 4719340 Tpr1g1265 1 11334964 11339361 PCT