Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1217 ATGTTGCACAAATTTTCTTTGATGGCTTCTTATGGATTTCCTTCAGGTCTTGTTTTGCAACAAGAATATGTTGTCATGAAGGGTTGTCAACAATTGATGCCAAAACCAGAAATTATTAAGTGTCCTAATCTTAGGTTAAATTCATCTGATGAATTAAGAATGACATCAAAAGAATGGTTTGATTCAAATCAGTTTGTCAATTTTGATTTGTCAGCTCTAAAGCCTATGGTTGTTGATGTACAAGCAACTTGTCCAAGCACAGTACTTTTTAGCGCTGGTGTCGTTGATCAATGCACTGAGCATGAAAACACTTTACAGCATATCACATCTGAGACTGCTGAAGCAGGTATAAGCGGTGTTCGTAAGGCTTTGCTGTCTGACTTGATGGGTTTGCAACTTTCAGGCATTGATATACCTCAATTACCATTACCACCTCTCGTATACCCAAATAAGACATTCTACTTCTCGAAGCCTTTGCTTGATATTTTTCAAGATTCAGCATTTCGTTCAAAAATTACAGTTCATCCAGATGGTCAAGTCACATTTATGGGTACAGAAATTGAGATGAAAGATCTTCTTGCCGTAGTTGCTGAATCATACTTAACAGAACGCACACATAAGGGAGAAAAACAGTCTATGCTTGTTCCACACTTCAATAGGCTGATTATAAATGAAGTAGAGGCCAGAAGTCATTCCTCCACGTTGGATATTCACTCTACACTGACTGTTCCTTTAAAAAGACCTGAGAAAGTTAAAGGAAAGCCTTTACAAAAAAAGAACAAGAAAGTAGCCAGGGAGAGGGATCTCTTCAAGAAGAACTACGTTCATGCATGTGAAAGCCTTCTGTTCTTGATGGCTAATAATAGGCATCATCGGGAAACAGCAATTCTTTCACTGAAGAAATCTGGCCCAGAGCTTTCCGAGCTCCTGACACAATTCTCAGTGGGCATTGCTGGTACTGGCCTTGCTGTTGTGCTATCTGTGATCTGCAAGCTAGCTTGCGGAAGGGTCCCATTTTGTGCATCTAAGGTCTTCAACACGGGGTTGGGTTTTGGGCTGGTTTGGCTTTCTTGTGGAGTAAATAAGCTGAGGGATACAATTGTTAACATAAACAAAAAGGCTGGAAAGACGGGATTGAAAGATAAGGAACTGATTCAAAAGGTGGATAACAGCCTAAAAGAAGTTTACTTTAGAGCTGCAGCATTGCTAGTAGTTGCAGTGCTAAGGCTTGCTTGA 1236 0.3997 MLHKFSLMASYGFPSGLVLQQEYVVMKGCQQLMPKPEIIKCPNLRLNSSDELRMTSKEWFDSNQFVNFDLSALKPMVVDVQATCPSTVLFSAGVVDQCTEHENTLQHITSETAEAGISGVRKALLSDLMGLQLSGIDIPQLPLPPLVYPNKTFYFSKPLLDIFQDSAFRSKITVHPDGQVTFMGTEIEMKDLLAVVAESYLTERTHKGEKQSMLVPHFNRLIINEVEARSHSSTLDIHSTLTVPLKRPEKVKGKPLQKKNKKVARERDLFKKNYVHACESLLFLMANNRHHRETAILSLKKSGPELSELLTQFSVGIAGTGLAVVLSVICKLACGRVPFCASKVFNTGLGFGLVWLSCGVNKLRDTIVNINKKAGKTGLKDKELIQKVDNSLKEVYFRAAALLVVAVLRLA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1217 411 PANTHER OS05G0143300 PROTEIN 4 411 - -
Tpr1g1217 411 PANTHER PROTEIN, PUTATIVE-RELATED 4 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1217 Tpr-Chr1 10889677 10893923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1217 - - gmx:100800200 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1217 1 10889677 10893923 Tpr1g1217 1 10889677 10893923 ECH
Tpr6g3592 6 39018105 39024980 Tpr1g1217 1 10889677 10893923 PCT