Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0979 ATGGTGTCAGCTAACGACCCAGTTGAGTCTTTTTTCAATTCCATTCAAGTTATGAAGGAATCGCTTTCACCACTTGAAGTCGGTTTTCGTAAGGCGGCGAAGGATTTTGAGCATTGTTTTTCAGGTGCAAAGAATAATCGCATTAATGGTGTTTGTTTAATTGCTCAAGTGAAAGATGGTGGTGAATTTCAGATCTGTGATGTTAAGAAGAAAAAAGGGTTATCAATGAAGGTTCCTTTGAAGTCCTTTTTGGGTATGTTTTCACAGAATTCAGGAAATGGTAATAAAACTCAAGTTGTTAAAGAAAATGAATCTTCTTGCAGTAATTGTTTGAAATTTTCTGTGACTTGGTCTTTGTTGGTTAGTGGGTTTTTTCAGTCATTGCCAATTCCTTTTAAATCTGGGAAAAAGAGGTTTCAGAAAGTGTGTGATGAAGATAATAATAATAAGGATAAGTGTTCATGCATGAAACAAACTTTTTCATCATGTGAAGTGAAACATAATGAGTCTAAGGGTCAATTTGTTAGGACAGTTAAGGAAAAGGTTGTGAAGAGGAAAGATGGAAAACAACATGTTTCACTTGAATGTCTTATAGGTTTTATCTTTGAACAATTGTCTCATACACTTCAGAATATTGATCATGGAATCAATGGAATGCAAGGGAATAATAATGACATTGAGTGCGAGAAAACTTCGTTGCATTCAGCTCCTTTTGGTCATGTTAATGCATTTACAAGTTTCTTGGAAGGGCACAAAGTGGATGTGAATGGTTTCTTAGGGAATTTGAATTTTGCAAAGGTGGGTGGTGTGCCATCAAGTGCAGCTGGGGAAGAAATAGCATCGCAGAAGGAAATCGGAGATAGTGGTAATGATGAAATTAAGGAAGAAAGTGTGGGAATTTCGGCGCAGAAGGTTGCGTCAAACATATTCAGCATTCCTTTAACAAATGTGGAGCGTCTAAAGACTACACTTTCAACTGTTTCATTGACTGAGTTGATTGAATTGCTACCGCAGCTTGGGAAAACATCGAAAGACCATCCTGATAAGAAGAAGCTATTCTCTGTACAGGATTTCTTTAGATACACAGAATCTGAAGGGAGGAGATTCTTTGAGGAGTTAGACAGAGATGGCGATGGCCAAGTAACTTTAGAAGATCTAGAAATTGCAATGAGAAGGAGAAAGCTTCCACGAAGATATGCTAAAGAGTTCATGAGCCGCACTAGAAGTCATTTATTCTCTAGGTCTTTTGGTTGGAAACAATTCTTATCATTCATGGAACAAAAGGAGCCAACGATTCTTCGTGCATACACTTCTTTGTGTTTAACCAAGTCAGGGACGTTGAAGAAAAGTGAAATATTGGAGTCACTAAAGAATTCAGGACTGCCTGCAAATGAAGACAATGCTGTCGCAATGATGCGATTTCTAAATGCAGACACAGAAGAATCTATCTCATATGGACATTTCCGCAATTTCATGCTCCTGCTTCCCTCAGACCGTCTTCAAGAGGATCCTAGGAGTATTTGGTTTGAAGCTGCAACTGTAGTTGCGGTTCCACCATCCGTCGAAATTCCTGCTGGAAGTGTTCTAAGATCTGCATTGGCAGGTGGCCTTTCTTGTGCCCTGTCATGTGCATTACTGCATCCAGTTGATTCAATCAAGACTCGAGTACAAGCATCAACTATGTCCTTCCCTGAAATAATTGCTAAGCTGCCAGAGATCGGAACACGTGGTTTATACAGGGGTTCAATCCCTGCAATTCTTGGACAGTTTTCAAGCCATGGCCTGCGAACTGGGATATTTGAAGCGAGTAAATTGGTGTTGGTAAATGTTGCTCCGAATTTACATGAACTCCAGGTACAATCTATAGCATCATTCTGTAGCACATTTTTGGGAACAGCTGTGCGGATACCCTGTGAGGTGTTGAAGCAGAGATTGCAGGCTGGTCTTTTCGACAATGTGGGCGAGGCTTTGGTTGGGACTTGGAGGCAAGATGGTCTTAAGGGATTTTTTCGTGGAACCGGAGCAACACTTTGTCGAGAGGTTCCATTTTATGTTGCTGGCATGGGGCTTTATGCTGAATCTAAAAAGGGTGTCCAAAAGCTACTTGGACGTGAACTCGAGGCCTGGGAAACAATTGCAGTTGGAGCCTTATCCGGTGGCTTGGCAGCTGTTGTTACGACACCGTTTGATGTCATGAAAACTAGAATGATGACTGCGCAAGGTCGGTCTGTGTCAATGAGCTTAGTAGCTATCACTATTCTCCGCCATGAGGGACCCCTTGGCTTATTCAAAGGAGCAGTTCCTAGATTCTTTTGGATTGCTCCTTTTGGTGCCATGAACTTTGCAGGTTATGAGTTAGCAAGGAAGGCCATGAATAAAAATGAAGAGGCTAAGACTGGAAATTTAGACTAA 2412 0.4092 MVSANDPVESFFNSIQVMKESLSPLEVGFRKAAKDFEHCFSGAKNNRINGVCLIAQVKDGGEFQICDVKKKKGLSMKVPLKSFLGMFSQNSGNGNKTQVVKENESSCSNCLKFSVTWSLLVSGFFQSLPIPFKSGKKRFQKVCDEDNNNKDKCSCMKQTFSSCEVKHNESKGQFVRTVKEKVVKRKDGKQHVSLECLIGFIFEQLSHTLQNIDHGINGMQGNNNDIECEKTSLHSAPFGHVNAFTSFLEGHKVDVNGFLGNLNFAKVGGVPSSAAGEEIASQKEIGDSGNDEIKEESVGISAQKVASNIFSIPLTNVERLKTTLSTVSLTELIELLPQLGKTSKDHPDKKKLFSVQDFFRYTESEGRRFFEELDRDGDGQVTLEDLEIAMRRRKLPRRYAKEFMSRTRSHLFSRSFGWKQFLSFMEQKEPTILRAYTSLCLTKSGTLKKSEILESLKNSGLPANEDNAVAMMRFLNADTEESISYGHFRNFMLLLPSDRLQEDPRSIWFEAATVVAVPPSVEIPAGSVLRSALAGGLSCALSCALLHPVDSIKTRVQASTMSFPEIIAKLPEIGTRGLYRGSIPAILGQFSSHGLRTGIFEASKLVLVNVAPNLHELQVQSIASFCSTFLGTAVRIPCEVLKQRLQAGLFDNVGEALVGTWRQDGLKGFFRGTGATLCREVPFYVAGMGLYAESKKGVQKLLGRELEAWETIAVGALSGGLAAVVTTPFDVMKTRMMTAQGRSVSMSLVAITILRHEGPLGLFKGAVPRFFWIAPFGAMNFAGYELARKAMNKNEEAKTGNLD* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0979 803 Gene3D - 318 432 - -
Tpr1g0979 803 Gene3D Mitochondrial carrier domain 530 802 IPR023395 -
Tpr1g0979 803 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Tpr1g0979 803 ProSiteProfiles Solute carrier (Solcar) repeat profile. 615 697 IPR018108 -
Tpr1g0979 803 SUPERFAMILY EF-hand 366 496 IPR011992 -
Tpr1g0979 803 Gene3D - 443 514 - -
Tpr1g0979 803 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 121 796 - -
Tpr1g0979 803 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN-LIKE 121 796 - -
Tpr1g0979 803 ProSiteProfiles Solute carrier (Solcar) repeat profile. 706 790 IPR018108 -
Tpr1g0979 803 SUPERFAMILY Mitochondrial carrier 527 785 IPR023395 -
Tpr1g0979 803 ProSiteProfiles EF-hand calcium-binding domain profile. 361 396 IPR002048 GO:0005509
Tpr1g0979 803 Pfam Mitochondrial carrier protein 527 607 IPR018108 -
Tpr1g0979 803 Pfam Mitochondrial carrier protein 619 699 IPR018108 -
Tpr1g0979 803 Pfam Mitochondrial carrier protein 706 794 IPR018108 -
Tpr1g0979 803 ProSiteProfiles Solute carrier (Solcar) repeat profile. 526 606 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0979 Tpr-Chr1 8506967 8518205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0979 1 797 EF-hand Containing Proteins AT2G35800 65.301 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0979 - - gmx:100807842 1277.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0979 1 8506967 8518205 Tpr1g0979 1 8506967 8518205 ECH