Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0963 ATGGCTTCAATCGCCGATAACCCTAACCCTAACCCTAATCAAGAACCAGAACAATCCATAATTCCAGTATTAACAGTTTTCAAAAACAAATCAATCCTCAAGAACATCTTCATCGTTCTCAACGATAATGACGATAACAACAACAACAACGATCACACTCTTCTCGTTGGTCGACACCCGAATTGCAACATAGTCCTTACTCATCCTAGCATCAGTCGTTTCCATCTGCAAATTCGATTCACTCCTTCTTCCCGCTCCATTTCGCTTCTCGATTTATCTTCTGTGCACGGAACTTGGGTGAGTGGTAGAAAGCTTGAGCATGGTGTGAGTGTTGAACTTAAAGAAGGTGATAGCTTTCAACTTGGGGTTTCAAGTAGGATTTATCTTCTTCACTTTGTTTCCAAATTCGACGCCGACGCATTAAATATAAACGAAGCTTGTCCAGATGTGGAGATGCTGGAAGAGACTAATTTGATTGGTACATTGAAGGAATGTTTTAAACACAACATATGTATCCTGGGCACTAAATCGAACCAACAATCTTCAGCGGAAAAACAGTGGATTAAGCCTGAAGCATCTTTGGATGAAAAAGATGCTGCTGCTGTGGCTGTGATATCTAAAGAATCTGATTTTGAAGTCACGTTCGAAGACACTGACAAGATTGAAGATATTTTAACTACTGGATCAAGAGTTTTTGATTCTGAGGACATGACTGATTCTGAATCTCATCCGACCAATTCTGATGCGGAACTTTCTGCGGATTCACTCTCTGATAGAGAAGAACAAGGTAATTGCGGTGAAAACTATGAGACAGAATTGCAGAACCTGAATGCTAATTGTTGCCTTGAGAAAGGGTATTCTCTTTATGAAATTGTTGAAGATATTGAAAAGAAGTGCACTGAAAATACGGATCCTGCGCCTTTTGATGAAAATGGTGTAGCTGCAGTGAATGTAGCACCTAGAGAACACAAATTAGAATTCTTCTTTGAAGAAAATGACAGGATTGACGACATTTTAACTAGTGTTGCAAGACTTTTCATTTCTGAAAACACATCTTCACTAGCTGAGGAAGCAATTCCTGTAATCAATTTTCAAGAAATCAAGATTGTTGAAGAAGTTGCTGTGGATTCAATATCTGATGGAGAAAAGGAAAATAAAGGTGACAAGGAATTGCAGGAATACCTAAATGTCAAACCTTGTGATGAAGAAGGTAGCTCACTGGATGAAACAGTTGAAGATACTATGAAATCCTTTCAGACAGAGTCACTTAATCCTTCGGTGACTCAGGAACCTGATTTAGAGATTACAGACCAGAAAGAGAGTCAGACCCCGCAATTTGTTGTTGCTGTGGATGGAAACGTTGACGTGGGAATCCTCAAAAGAAGCTGTATAGAAGAATCAGCAAAGGGAAGTTCAACCTTTGGTAGTGATGAAGAAGGTAGCTCACTGGATGAAACAGTTGAAGATACTATGAAATCTTTTCAGACAGAGTCACTTAATCCTTCGGTGACTCAGGAACCTGATTTAGAGATTACAGATAAGAAAGAGAATCAGCCCCCACAATCTCTTGTTGCTGTGGATGGAAACACTGATGTGGGAATCCTTGAAAGAAGCTGTGTAGAAGAATCAGCAAAGGGAAGTTCAACCTTTGGTAGTGATGAAGAAGGTAGCTCACTGGATGAAACATATGAAGATACTGTGAAATCCTTTCAGACAGAGTCACTTAATCCTTCAGTGACTCGGGAACTTGATTTAGAGATTACAGACAAGATAGAGAATCAGACCCCGCAATCTCTTGTTGTTGTGGATGGAAACATTGACGTGGGAATCCTTGAAAAAAGCTGTATAGAAGAATCAGCAAAGGGAAGTTCAACCTTTGGTAGTGATATTTTGTCAAAAAGAGATAAGGCTGCGAGTGCGCCTCAAGATCGAACCAGGAAGAGCAGATTATTGAACACGCTTAATGTTGACTCTAAATTTGTAATGAGTAACTTGAAGGATATCAATATCACAAATAAACCAATGCCAAAAGATCTTTTTTCTGTCTTGGATGAAGGAGAAATGTTCACTCCAAATAAGGAAAACTCAATCCCCACAAACACCTTTCACTGGCAGTTTATGGAAAACAAAGGTATGCTAGAAGAAAGTAAAAGTTCCAAGTCACAAAGGTCGCATAATTTGAATGCTAATTTTAGTCCCATCATCTATTCAGCTGAAATAAGTACAAGTGCAATCTCAAACAAAGAGAACCTGACTCCAAAAGAAGCACTAGAATGGATGTCCGGGAGAAAGCCTCTTGAGTGTCGCGATGCTACGGAATTAAGAAAGAAGAGAGTGGAACGGAAACCCTTACAATCGCTAATGAGTCCTGGAGGCAATTGCAATTCAAGGATCTCTAGTCCTCTTTCTGCTGCAAAATCCATTTTTGGGGTCACTGCTAGAGCCAGCAACTGTGGACATATTTCATACAAGCACACTGAACCTTCTAGTATTAGTGAAGAACGAAAGAAGAGCTGGGACATGGTTATAGATACTTCTTCCCTTCTGAACAAGGAGTCCAGAAAAGCTTTGCAGCTTTTACAAGGTCTCAAGGGGACTCGTTTAATCATTCCACAATCAGTCATAAGAGAATTGGGAAGCATTAAGCAACAATTTGGAATTTTTAGAAAGACTTCAGAGGCTGACTTGGCCTTGAAATGGATTGAAGAATGCATGGAGAATACAGAGTGGTGGATTCATATCATTGACTGTGCTTTTCCTATGGTTGAAGATCACATCCTTGACTGTGCTCTTGAATATAAAAGAAAAGATAATGTTGGACAAATTGTCCTTCTTAGTGATGATATCATCTTGAAAATCAAATCCATGGCAAAGGGGTTGCTATGTGAGACAGTGCAGCAATTTCGTCAGAGTTTAGTCAACCCTTTCTCTGAGAGGTTTATGTGGGCTAACAGCTTTCCAAGAGGACTGACTTGGTCTTGCCAAGATGATGTGGTTTTAAGAGAGAAATATTGCTGTTTGCCATCAAAGGCTGGTCTGAAGCTCCTTGTCAGTTAA 3057 0.3978 MASIADNPNPNPNQEPEQSIIPVLTVFKNKSILKNIFIVLNDNDDNNNNNDHTLLVGRHPNCNIVLTHPSISRFHLQIRFTPSSRSISLLDLSSVHGTWVSGRKLEHGVSVELKEGDSFQLGVSSRIYLLHFVSKFDADALNINEACPDVEMLEETNLIGTLKECFKHNICILGTKSNQQSSAEKQWIKPEASLDEKDAAAVAVISKESDFEVTFEDTDKIEDILTTGSRVFDSEDMTDSESHPTNSDAELSADSLSDREEQGNCGENYETELQNLNANCCLEKGYSLYEIVEDIEKKCTENTDPAPFDENGVAAVNVAPREHKLEFFFEENDRIDDILTSVARLFISENTSSLAEEAIPVINFQEIKIVEEVAVDSISDGEKENKGDKELQEYLNVKPCDEEGSSLDETVEDTMKSFQTESLNPSVTQEPDLEITDQKESQTPQFVVAVDGNVDVGILKRSCIEESAKGSSTFGSDEEGSSLDETVEDTMKSFQTESLNPSVTQEPDLEITDKKENQPPQSLVAVDGNTDVGILERSCVEESAKGSSTFGSDEEGSSLDETYEDTVKSFQTESLNPSVTRELDLEITDKIENQTPQSLVVVDGNIDVGILEKSCIEESAKGSSTFGSDILSKRDKAASAPQDRTRKSRLLNTLNVDSKFVMSNLKDINITNKPMPKDLFSVLDEGEMFTPNKENSIPTNTFHWQFMENKGMLEESKSSKSQRSHNLNANFSPIIYSAEISTSAISNKENLTPKEALEWMSGRKPLECRDATELRKKRVERKPLQSLMSPGGNCNSRISSPLSAAKSIFGVTARASNCGHISYKHTEPSSISEERKKSWDMVIDTSSLLNKESRKALQLLQGLKGTRLIIPQSVIRELGSIKQQFGIFRKTSEADLALKWIEECMENTEWWIHIIDCAFPMVEDHILDCALEYKRKDNVGQIVLLSDDIILKIKSMAKGLLCETVQQFRQSLVNPFSERFMWANSFPRGLTWSCQDDVVLREKYCCLPSKAGLKLLVS* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0963 1018 ProSiteProfiles Forkhead-associated (FHA) domain profile. 54 105 IPR000253 GO:0005515
Tpr1g0963 1018 Pfam PIN domain 841 965 IPR002716 -
Tpr1g0963 1018 CDD FHA 22 125 IPR000253 GO:0005515
Tpr1g0963 1018 SUPERFAMILY SMAD/FHA domain 49 134 IPR008984 GO:0005515
Tpr1g0963 1018 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 11 599 - -
Tpr1g0963 1018 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 552 1017 - -
Tpr1g0963 1018 Gene3D - 2 133 - -
Tpr1g0963 1018 MobiDBLite consensus disorder prediction 231 264 - -
Tpr1g0963 1018 SMART FHA_2 53 105 IPR000253 GO:0005515
Tpr1g0963 1018 PANTHER TRANSMEMBRANE PROTEIN 18 552 1017 - -
Tpr1g0963 1018 PANTHER TRANSMEMBRANE PROTEIN 18 11 599 - -
Tpr1g0963 1018 SUPERFAMILY PIN domain-like 841 973 IPR029060 -
Tpr1g0963 1018 Pfam FHA domain 55 122 IPR000253 GO:0005515
Tpr1g0963 1018 SMART PIN_9 839 953 IPR002716 -
Tpr1g0963 1018 MobiDBLite consensus disorder prediction 467 488 - -
Tpr1g0963 1018 Gene3D - 836 973 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0963 - - mtr:MTR_1g096000 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0963 1 8324502 8329095 Tpr1g0963 1 8324502 8329095 ECH