Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0951 ATGGCTCAGCAGAGGCAATCGGGAACGGAGAGGCTTGGGGTGAGGCACGATCTACATAACACCAATGGCTCCGGTGGTGATCATGTTTCTGTTGCGATTCGCGGTGGTGTTGGTGTTTCTCATAAACAGCAAAGGTTCCGGCGATCGGCGCGATCCGACAGAGGAGCGCGTTTTACGGTGGTTGCAATCTTAGTTTTTCTCTTCCTTGTACTTGTTGTCACTTTTCTGGCGTTTTCTTATATTTCTAGAGAAGAAATAATTGATAAGGGTGATGATCATGATACTGGTGAAGTAAAGAATGATTCTGATTTTCTGACAAATGTACCACGAATAGAGAAGAAAGTTCTTGGGTTTGGACATGCTTCTGGGGGACATGGTCGAGATTCGAGGTATTGGGATAAGGATGATAGGAGAAGGGATGGTGATTATGATGAGGATATGAAGGAGCAGATAAGTAGGGATCTTGGAGATGCAAATGCTGAAGATGATGCTCGTGTAAAGACGAATCTTGAGATTAAGTCTTCTCAGGATGGTTCTTACAAGGGTTTAAAGCGAAAAGGTGTTGGCTTGTATAATGAAGCGGGGCGTCATGAATTGAAAAGGTATGAAGCTGAGTACGAGGCTTCTTTGAAGAATGTGAGACATTCTGCTGAAAGTGATGGGAAATTGCCGCAGGATGCTGATATGGAAAAGAAGAATGCGGCTGTTGACATTGATGATGAGTATGATGACTTTTTCGATGCTCATGATGGTCAAACGGAAGAGTCTGCTGATGGTGGAAATATGAGTGGGAAACATGTTAATTCTGATGCACTAAGTTTGGACGATGAGGTTCAGAAAGAATCTCATGGTTCTTTGGATAATGATGATATTGCTTCTGAGGAAGATATTGATGGGGAATCTTCCACTATTAACAAAAAAAAATCTCGCAGTGGGAAAACAAATTCTAGACTTGCAAATACAGAAACAAAGAGGAAAGGCAAGCATCACAAACACTCAGGATCCTGTGACATGAAGTTGTTAAACTCAACTTCGCAACTTGTAGAACCACTAGAAAGTCGAAAATTTGCAAGATTTAACTTACAATACACAGAGACAGAAGAGAAGCCACTGGGAGTTGAACAATGGACGCCAAGATTTGCCGGCCATCAGAGCTTAGAAGAGAGAGAAAATTCATTTTTGGCACGTGATCAAAACATAAAATGTGGTTTTGTTAAAGGTCCTGAAGGTTCACCCAGCACTGGATTTGACATGTCAGAAGATGATGAAAGTTACATTAGCAGATGCCACATTGCTGTGATTTCATGCATATTTGGAAATTCTGACCGTTTGAGGACCCCAGCCACCAAAACGATCACTCGTTTGTCAAGGAAGAATGTCTGCTTTGTTATGTTTACTGATGAAGTTACGGTACGGACACTTTCTTCTGAAGGCCATGCGCCTGATAGAATGGGTTTCATCGGCTTTTGGAAGTTAGTGGTAGTGAAGAACCTACCTTATGATGATATGAGGCGAGTGGGCAAAATACCGAAGTTATTGGCCCATCGACTTTTTCCCTTTGCAAGGTATTCAATTTGGTTGGATAGCAAATTAAGGCTGCAGCTTGATCCTTTACTCATCTTGGAGTACTTTTTGTGGCGAAAGGGTTATGAATTTGCAATATCCAATCACTATGATCGGCACTGTGTGTGGGAAGAGGTGGCGCAAAACAAGAAATTGAACAAGTATAATCATACGGTTATAGATCAACAGTTTGCATTTTACCGGGCTGATGGACTCCAAAGATTTAATGCATCAGATCCAAACAAGCTTCTTCCAAGCAATGTACCAGAAGGTTCTTTTATTATTAGGGCACACACCCCTATGTCAAATTTGTTCAACTGTCTTTGGTTCAATGAAGTTGAACGATTTACTCCTCGTGATCAGCTGAGTTTTGCTTATACTTATCAGAAGCTGAGAAGGATGAATCCTGATAAACCTTTTCATCTTAATATGTTCAAGGACTGTGAACGGAGACACATGGCCAAGTTGTTCCATCATAGAATGGACGAGAAGAGGGGTACAAGTCAAAAAGCAACCAAATAA 2085 0.4149 MAQQRQSGTERLGVRHDLHNTNGSGGDHVSVAIRGGVGVSHKQQRFRRSARSDRGARFTVVAILVFLFLVLVVTFLAFSYISREEIIDKGDDHDTGEVKNDSDFLTNVPRIEKKVLGFGHASGGHGRDSRYWDKDDRRRDGDYDEDMKEQISRDLGDANAEDDARVKTNLEIKSSQDGSYKGLKRKGVGLYNEAGRHELKRYEAEYEASLKNVRHSAESDGKLPQDADMEKKNAAVDIDDEYDDFFDAHDGQTEESADGGNMSGKHVNSDALSLDDEVQKESHGSLDNDDIASEEDIDGESSTINKKKSRSGKTNSRLANTETKRKGKHHKHSGSCDMKLLNSTSQLVEPLESRKFARFNLQYTETEEKPLGVEQWTPRFAGHQSLEERENSFLARDQNIKCGFVKGPEGSPSTGFDMSEDDESYISRCHIAVISCIFGNSDRLRTPATKTITRLSRKNVCFVMFTDEVTVRTLSSEGHAPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLAHRLFPFARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVAQNKKLNKYNHTVIDQQFAFYRADGLQRFNASDPNKLLPSNVPEGSFIIRAHTPMSNLFNCLWFNEVERFTPRDQLSFAYTYQKLRRMNPDKPFHLNMFKDCERRHMAKLFHHRMDEKRGTSQKATK* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0951 694 PANTHER ALKALINE CERAMIDASE-RELATED 20 693 IPR006852 -
Tpr1g0951 694 MobiDBLite consensus disorder prediction 276 338 - -
Tpr1g0951 694 MobiDBLite consensus disorder prediction 276 290 - -
Tpr1g0951 694 Coils Coil 192 212 - -
Tpr1g0951 694 Pfam Protein of unknown function (DUF616) 361 680 IPR006852 -
Tpr1g0951 694 PANTHER TRANSMEMBRANE PROTEIN (DUF616) 20 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0951 Tpr-Chr1 8215321 8223055 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0951 - - gmx:100810524 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0951 1 8215321 8223055 Tpr1g0951 1 8215321 8223055 ECH