Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0948 ATGGGTGACAAAAGAAAAAAGCACCGTCGTCAACAGGATTCAACCTCTCCTTCTTCTTCATCCTCCACCGACTCCGATTCAGATTCCGACTGCTCTTCTCGTCGCCGCCGTCATCGCCGTGAAAAGGACCGCCGCAGAAAAACCGAAGGAAGCTCCAAGCGAGAAAAAGAGAGCAGAAGAAAGGAAAAGAGAAAAAAGAGAGACAGAGATAGGAAAAAAACCAAGAGGCACCACTATTCCGATGACTCCAATTCTTCCGACGATGAAATTCAACCACAAACCGCACTCCGTGAAATGATGACCGAGTTTCCCAATGTTGGCAACGATTTAATGCAGCTATTGCAAATGATTGATAATGGACAAGCTGTGGACATAAAGGATATATCAGAGAGGTCTCTAGTGAAGCATTTGAAAAAGCTCTTCATTTCCTTAAATCTTAAGGAAAATGGGGATAGAGTTTTTTTGTTGCCTTCTAAGGCTTCTCCTACTTTAGATGTTGTTGGCCCTCTAATTCAATCTTATATGCATCCGGTGAATGGTCGAACGGAACCTTTAGCAACATTGCCTGAAACATCGGCTCCGGCAGAACAGGTGGTAGATGATGATTCAATTGAACCTCCTGAGGATCATTCTGTTGGTCCTAAGAAAAGGGTGATTGGTCCTGCAATGCCGTCTGCTGAATTACTTGCTGCTGCTGCTAAATTAACAGAGGCACAGACCGAGTTCAGAGAAGCTGAATTGGATGATGATACTGAACTATTTGTGGGACCTCCACCTCCTGCTATGGTTACTGAAGCAGAATCAGCAAATGAAGCAGAACGTTTTGAAGAGGTCACCAGGATAATGGAAGCTGGGATCGACAGCCCATATGATGTTCTAGGAGTTAACCATAATATGTCCGATGTTAACATAAAGAAAAGGTACTGGAAGATGTCACTCTTAGTTCATCCAGATAAATGCTCTCATCCACAAGCCCATCAAGCATTTATTAAATTAAATAAAGCTTTTAAAGAGTTACAAGATCCAGAAAAGCGGAAAGCAATGGATGATAAAATCAAACTCAAACAAGAACAGGAGGACTTTAAGGCTGAACTTAAAGTCATGCGAGAGAATGCACTGTGGAGAAGATCCCAAGGTATATCCATGGAGGGTGATGAGGAGCTTCTGGCACAGACAGAGGTTAAAGTGGAACCCACAAGAGATGAATGGATGACAACACTGCCTCCCGAGAGGAAACCTGGTGGCGTGTCTATGCAATCAACCCAATTTAGTCGGGGAACAAAGGAAGGTAGAGGAGACACTAGTATTTGGACAGACACCCCTAACGACAGAGCGCAGAAAGCAAAGATGAATTATTTGGAAGCATACAATCAGGCCACTGCACTAGCCTCAAACGAAGAAGACAAGAAAAGGGCTAGTACAGATGCAGATTTGGTGGACAAATACAACAAAGCAAAACGATCGAAAACATTGGTGCAAAAACATCAAGAAGAGGTTGTTAGCAAATCCAAGAAAAAGTCCAAGCAACATACGACGGATAAGGATAAGGGAGAATGGATAGGTCAACATCCATGGAAGCCTTGGGATCGTGAAAAGGATCTGACTGCTGGGAGGATGAAAGTAAAACTCGATGCAGAAGGCATGTCTGAGGGATTATCTTCAAGGTTTAATTCTGGAAACTTTCAAAGGAACTTCCTTTGA 1701 0.4321 MGDKRKKHRRQQDSTSPSSSSSTDSDSDSDCSSRRRRHRREKDRRRKTEGSSKREKESRRKEKRKKRDRDRKKTKRHHYSDDSNSSDDEIQPQTALREMMTEFPNVGNDLMQLLQMIDNGQAVDIKDISERSLVKHLKKLFISLNLKENGDRVFLLPSKASPTLDVVGPLIQSYMHPVNGRTEPLATLPETSAPAEQVVDDDSIEPPEDHSVGPKKRVIGPAMPSAELLAAAAKLTEAQTEFREAELDDDTELFVGPPPPAMVTEAESANEAERFEEVTRIMEAGIDSPYDVLGVNHNMSDVNIKKRYWKMSLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDDKIKLKQEQEDFKAELKVMRENALWRRSQGISMEGDEELLAQTEVKVEPTRDEWMTTLPPERKPGGVSMQSTQFSRGTKEGRGDTSIWTDTPNDRAQKAKMNYLEAYNQATALASNEEDKKRASTDADLVDKYNKAKRSKTLVQKHQEEVVSKSKKKSKQHTTDKDKGEWIGQHPWKPWDREKDLTAGRMKVKLDAEGMSEGLSSRFNSGNFQRNFL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0948 566 Pfam DnaJ domain 289 349 IPR001623 -
Tpr1g0948 566 CDD DnaJ 289 341 IPR001623 -
Tpr1g0948 566 ProSiteProfiles dnaJ domain profile. 288 353 IPR001623 -
Tpr1g0948 566 MobiDBLite consensus disorder prediction 415 442 - -
Tpr1g0948 566 Coils Coil 344 371 - -
Tpr1g0948 566 MobiDBLite consensus disorder prediction 191 217 - -
Tpr1g0948 566 MobiDBLite consensus disorder prediction 58 74 - -
Tpr1g0948 566 Coils Coil 228 248 - -
Tpr1g0948 566 MobiDBLite consensus disorder prediction 404 442 - -
Tpr1g0948 566 MobiDBLite consensus disorder prediction 486 533 - -
Tpr1g0948 566 MobiDBLite consensus disorder prediction 1 90 - -
Tpr1g0948 566 Pfam Protein of unknown function (DUF3752) 408 556 IPR022226 -
Tpr1g0948 566 SUPERFAMILY Chaperone J-domain 263 346 IPR036869 -
Tpr1g0948 566 Gene3D DnaJ domain 272 372 IPR036869 -
Tpr1g0948 566 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 566 - -
Tpr1g0948 566 SMART dnaj_3 287 344 IPR001623 -
Tpr1g0948 566 PRINTS DnaJ domain signature 290 308 IPR001623 -
Tpr1g0948 566 PRINTS DnaJ domain signature 308 323 IPR001623 -
Tpr1g0948 566 PRINTS DnaJ domain signature 324 344 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0948 Tpr-Chr1 8195545 8203425 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0948 - - aip:107618276 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0948 1 8195545 8203425 Tpr1g0948 1 8195545 8203425 ECH