Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0930 ATGGGGGGCATTTGTTCAAGATCATGGAAAGCAACTGTAGATGGTGTAGCTGTAGATAATGTACCTGGTGAAAGTTCAAGACATTCTGCTAATGGTCATGCTACTAATAATGAACCTGGAATGACTTATCAGTCTATTTCTGCAAATATAAATAGTAATTCAACTTTGCATCCTCTTGCTGATGAGTTGGATAAGCATCAACGAGAATCGTTTTCTTTTACTGGATTGGAAAAGGTACCGTATGGTCCGGGTGCTGAAGATATCAATGATGGGATTCCTCGCCTGCCTCGGACATTATCGCACAAATCTAGAAAGACTGTTAAGGTATCAGAAGTGAGTTCACTATTAGGCAGAGCTGGTACAGCTGGGCTTGGCAAGGCAGTAGATGTTTTGGACACACTAGGTAGTAGTATGACAAATTTGAATCTCAGTAGTGGTTTTACATCGGGAGTTACAACAAAAGGAATTAAAATTTCAATTTTGGCCTTCGAAGTAGCAAACACAATAGTTAAGGGTGCCAATCTAATGCAATCTCTTTCAAAAGAGAACATTAAGCATTTAAAAGAGGTGGTTCTACCGTCTGAAGGAGTGCAAAAGTTGGTATCTACAGATATGAATGAACTCCTGAGAATTGCTGCTGCAGACAAGAGAGAAGAATTGAGAATATTTTCTGGCGAAGTTGTGCGTTTTGGAAATCGATGCAAAGATCCTCAGTGGCACAACCTGGAACGCTATTTTGAGAAGTTAGGTTCAGAGCTTTCACCGCAAAGGCAATTGAAAGAGGAGGCAGAAATGGTGATGCAACAATTAATGAGCTTTGTTCAATATACCGCTGAATTATATCATGAGTTACATGCCTTAGACAGGTTTGATCAAGATTATCGACGCAAGCTTCAAGAAGAGGATAATTCAAATGCCACACAGAGAGGTGACAGCCTTGCAATCTTGAAAACAGAACTGAAGAGTCAAAAGAAACATGTAAGAAATTTGAAGAAAAAATCACTGTGGTCCAAGATTTTGGAAGAGGTGATGGAAAAGCTTGCAGATATTGTCCATTTTCTATATTTGGAGATAAACGAAGCATTTGGTAGTGCCGATACAGATAAGCAAGTGAAAGATTCTCAAGGAAACCATAAGAAGTTGGGAGCTGCTGGTCTTGCTTTGCATTATGCAAACATTATCACTCAAATTGATACTCTGGTGTCTCGGTCAGGTTCTGTGCCTCCTAATACTAGGGATGCTTTATATCAAGGGTTACCGCCTAATGTAAAATCAACATTGCGTTCAAGGTTACAGTCGTTTCAGGTTAAAGAAGAGCTTACTGTTCCACAAATCAAAGCTGAAATGGAGAAAACTTTGCATTGGCTTGTTCCTATTGCTGCCAACACAACAAAAGCTCATCATGGCTTTGGATGGGTTGGAGAATGGGCAAATACAGGGTCTGATGTCAACCGTAAACCTGCGGGTCAGTCAGACTTGTTGAGGATCGAAACACTACACCATGCGGATAAAGATAAAACAGAAGTGTATATACTTGAACTGGTTGTCTGGCTACATCACCTAGTGAGTCAAGTAAGAGTTGGTAACGGTGGAATAAGGTCCCCAGTCAAATCCCCGATTCGTTCTCCTAACCAGAAGACAATGCAGTTGTTTGCGCAAAAAGGCGGCTCTACTTCTCCGTTGTTAACAGTCGAAGATCAACAAATGCTTCGAGATGTTGGTAAGAGGAAACTAACGCCAGGCATCAGTAAAAGCCAGGAATTTGCAACTGCCAATACTAGGTTGAGCAAACACCATAGGCTAAGCAAGAGTAGTAATCATTCCCCTATCAGTGAAAGTAAAAGCGATATATTCTCTACAAGGAGGTTACCTTCTGTTCCTGTCATTGACTTTGATATTGACCGAATGAAGGCCTTGGATGTCATTGATAGAGTGGATACTATTGGAAGTTGA 1953 0.4071 MGGICSRSWKATVDGVAVDNVPGESSRHSANGHATNNEPGMTYQSISANINSNSTLHPLADELDKHQRESFSFTGLEKVPYGPGAEDINDGIPRLPRTLSHKSRKTVKVSEVSSLLGRAGTAGLGKAVDVLDTLGSSMTNLNLSSGFTSGVTTKGIKISILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQKLVSTDMNELLRIAAADKREELRIFSGEVVRFGNRCKDPQWHNLERYFEKLGSELSPQRQLKEEAEMVMQQLMSFVQYTAELYHELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILKTELKSQKKHVRNLKKKSLWSKILEEVMEKLADIVHFLYLEINEAFGSADTDKQVKDSQGNHKKLGAAGLALHYANIITQIDTLVSRSGSVPPNTRDALYQGLPPNVKSTLRSRLQSFQVKEELTVPQIKAEMEKTLHWLVPIAANTTKAHHGFGWVGEWANTGSDVNRKPAGQSDLLRIETLHHADKDKTEVYILELVVWLHHLVSQVRVGNGGIRSPVKSPIRSPNQKTMQLFAQKGGSTSPLLTVEDQQMLRDVGKRKLTPGISKSQEFATANTRLSKHHRLSKSSNHSPISESKSDIFSTRRLPSVPVIDFDIDRMKALDVIDRVDTIGS* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0930 650 MobiDBLite consensus disorder prediction 583 617 - -
Tpr1g0930 650 PANTHER OS01G0873900 PROTEIN 1 648 IPR045021 GO:0045927
Tpr1g0930 650 Pfam Domain of unknown function (DUF3475) 160 216 IPR021864 GO:0045927
Tpr1g0930 650 Pfam Protein of unknown function (DUF668) 381 465 IPR007700 GO:0045927
Tpr1g0930 650 Coils Coil 313 333 - -
Tpr1g0930 650 PANTHER - 1 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0930 Tpr-Chr1 7970721 7979197 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0930 - - gmx:100812676 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0930 1 7970721 7979197 Tpr1g0930 1 7970721 7979197 ECH
Tpr1g0930 1 7970721 7979197 Tpr2g0033 2 482898 490416 PCT