Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0876 ATGGCTCCTTCTAGCAAGGCTGAGAAGAAGGCAGCCGTAGATGCTGCTGCATGGATGTTCAATGTTGTCACTTCTGTTGGAATTATCATCGTAAACAAAGCTTTGATGGGCGGCTATGGCTTCAGTTTTGCTACAACGTTAACGGGTCTTCATTTTGTTACTACAACTATCATGACGGTCGTACTACGGATGCTGGGATATGTCCAGCCTTCTCATCTTCCCTTGTCCGAACTTCTAAAATTTGTTTTCTTTGCTAACTTCTCCATTGTTGGAATGAATGTCAGTCTAATGTGGAATTCAGTTGGATTCTATCAAATTGCCAAATTGAGTATGATACCTGTATCCTGCTTGTTGGAAGTTTGTTTGGACAAGATTCGCTATTCAAGAGACACAAAACTGAGCATAGGTGTTGTTCTTTTGGGTGTTGGTGTTTGCACTGTTACTGATGTGAGTGTAAACATGAAAGGTTTTGTTGCTGCCTTTATAGCAGTGTGGAGCACATCTCTGCAGCAATATTATGTTCATTACCTTCAACGGAAGTATTCACTAAGTTCTTTCAACCTTTTGGGACACACAGCACCCGCACAGGCTGGATCACTACTGTTATTGGGCCCTTTTCTAGACTATTGGTTGACAAACAACAGAGTTGACCAATATGCTTATGATGTACCCTCTTCGATGTTCATACTCTTGTCATGCACAATTGCAGTTGGGACGAACCTTAGCCAATTTATCTGCATCGGCAGATTTACCGCTGTATCTTTCCAAGTACTTGGACATATGAAGACAATACTTGTTTTAATAATGGGATTCTTTTTCTTTGGGAGAGAAGGTCTCAATCTTCATGTGATTATAGGGATGATAATAGCTGTGGTTGGAATGATGTGGTACGGCAGTGCATCGTCAAAGCCTGGCGGAAAGGAGCGTTGGAGTCACTCTCTCCCGACCAACAAAACCGAAAGCCGGTGA 969 0.4231 MAPSSKAEKKAAVDAAAWMFNVVTSVGIIIVNKALMGGYGFSFATTLTGLHFVTTTIMTVVLRMLGYVQPSHLPLSELLKFVFFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVCLDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNMKGFVAAFIAVWSTSLQQYYVHYLQRKYSLSSFNLLGHTAPAQAGSLLLLGPFLDYWLTNNRVDQYAYDVPSSMFILLSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNLHVIIGMIIAVVGMMWYGSASSKPGGKERWSHSLPTNKTESR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0876 322 PANTHER - 7 310 - -
Tpr1g0876 322 PANTHER SOLUTE CARRIER FAMILY 35 7 310 - -
Tpr1g0876 322 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Tpr1g0876 322 MobiDBLite consensus disorder prediction 301 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0876 Tpr-Chr1 7439961 7443665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0876 18 320 Organic Solute Cotransporters AT1G21870 27.950 8.33e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0876 - - gmx:100786437 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0876 1 7439961 7443665 Tpr1g0876 1 7439961 7443665 ECH