Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0855 ATGGAAGTTGAGTTGGGTCTGAAGATCACAAGAACAATAGATGACAAAACTTCCATTTCTGATTTTCAGTTTGCCAAAGACAGAGCAGGTCCTGTCTTCTTATCTAAAGAAACTGATTCAACTTTCACCCTCACAGCACATCTCAAAGGTTATAAGAAAGAGAACATTGACATCATCATTAACAAAGATGGTACAAAACTTTCAGTGAGTGGTGAAAAGGAGGTGCAAGAAATGCAAATGATACCATTCAAGAAAGAGTTAAAAATAAAAGGGTTTAGAAAGAAGTTTAAAATACCTAATGAGGTGGTTTTGGATAGGATTAAGGCTAAGTATAATGAAGAGGAAGGAGTGTTGACAATAGTGATGCCAAAAATTGCAAAAGGAGTATTTTGTGGGGTGGGAATAGAAGAAGTGAAGGAAGAAGAGGGTGCAAATAGTATGGTATCAGAACCAGAACAACAAAGTGCAGCAGAAGAAGAAAAGGTTTTAGATCATAAGAGTGAAACTGAAGAGGAAAATGCTCCTGTGAAGAAGAAACGTCCTAAAAAACCATGGCAACCTTGTCCCCCTTTGGTTCTTGGAGGATCAACTTTGCTTGCAACTATTATCTTTCTTGTAATGCACTATATTAGAGCCAATAAGAGTTGA 648 0.3704 MEVELGLKITRTIDDKTSISDFQFAKDRAGPVFLSKETDSTFTLTAHLKGYKKENIDIIINKDGTKLSVSGEKEVQEMQMIPFKKELKIKGFRKKFKIPNEVVLDRIKAKYNEEEGVLTIVMPKIAKGVFCGVGIEEVKEEEGANSMVSEPEQQSAAEEEKVLDHKSETEEENAPVKKKRPKKPWQPCPPLVLGGSTLLATIIFLVMHYIRANKS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0855 215 MobiDBLite consensus disorder prediction 141 182 - -
Tpr1g0855 215 Pfam Hsp20/alpha crystallin family 36 125 IPR002068 -
Tpr1g0855 215 PANTHER HEAT SHOCK PROTEIN 26 141 212 IPR045045 -
Tpr1g0855 215 PANTHER HEAT SHOCK PROTEIN 26 1 181 IPR045045 -
Tpr1g0855 215 MobiDBLite consensus disorder prediction 154 179 - -
Tpr1g0855 215 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 141 IPR002068 -
Tpr1g0855 215 SUPERFAMILY HSP20-like chaperones 35 126 IPR008978 -
Tpr1g0855 215 Gene3D - 9 129 IPR008978 -
Tpr1g0855 215 CDD ACD_sHsps-like 36 124 - -
Tpr1g0855 215 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 141 212 - -
Tpr1g0855 215 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0855 Tpr-Chr1 7286311 7287545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0855 - - aprc:113873754 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0855 1 7286311 7287545 Tpr1g0855 1 7286311 7287545 ECH
Tpr2g0797 2 9687823 9694968 Tpr1g0855 1 7286311 7287545 PCT