Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0854 ATGCCAGCGACGGACTATCAAGGTTCGTCTCCTTCATCGTTAACAAATTTTGGTCGTTCAATTCTTAGTTTTCGTCGTGAACAGGTTCATTCAATGGAAGGGTCAACCTTAGAGATTGAACTTGATTATTTTCAAACACATGTTACTGATCGTTTTCTTGAATCATCTTCTGTTAATCAAGATGATTTGCTTTCACTCAAATGGGTTGGGAAGCTTCTTGATAGTTTTCTGATTTGTCAAGAAGAATTCAAAGCCATTCTTCATACTCATAAGGCTCAGGTTTTGAAATCTCCTTTGGATCGAATGGTTTCTGATTATTTTGAACGAAGTGTTAAGGCTTTGGATGTTTGTAACGCGATTCGTGATGGTGTCGAACAGATTCGATTATGGCAGAAGCTGTTGGAGATTGTTCTTTATGCATTGGATCAACAAAGGAGTCTTGGTGAAGGGCAATTTCGGAGAGCGAAAAAAGCTTTAATCGATTTGTCGATTAGTATGCTTGATGATAATAAGGATTCTAGTGCTATTGCACATAGAAATCGATCGTTCGGTCGTAGCAATGGTGGTAGAGACAAAGATCATAACCATCATCATAGTCATGGTGGTAATAGTCATACTAGCCATGGTAATAACAGCTATCAACATCGGTCTTTGGGGCATTTTAGATCGCTTTCGTGGAGTGTTTCTCGCAATTGGTCTGCTGCTAGACAACTCCAAGCAATTGGGAACAACATTAATCCTCCAAAAGCAAATGATCTTATGGCGACTAATGGTCTTGCAATGTGTGTTTACATCATGAATTCGATCTTGTTGTTTGTCATGTGGGCTCTTGTGGCTGCAATTCCATGCCAAGACCGCGGATTGCAGGTGCATTACTCCATTCCAAGGAGTTACACTTGGTCTATTCCATTTCTCTCGCTTCACGAGAGGATCATGGAAGAGTCCAAGAAGCGCGACAGGAAGAATGCTTGTGGCTTGCTTAGAGAAATTCAACAGATTGAGAAATGTGTTAGAGTCATGAGTGAATTGGCTGATTCGGTCCACTTTCCATTATCCGAGGAGAAGGAAGGGGAAGTTAGACAAAGAGTTCAAGAGGTTTCACATGTTTGTGATGCTTTGAAAGATGGACTCGATCCTTTGGAGCGCCAAGTGAGGGAAGTTTTCCATAGAATTGTTCGTAGCCGAACCGAAGGGCTTGACTCTCTTGGTAGGCCAAACAATGCTTCTGAATAA 1233 0.4128 MPATDYQGSSPSSLTNFGRSILSFRREQVHSMEGSTLEIELDYFQTHVTDRFLESSSVNQDDLLSLKWVGKLLDSFLICQEEFKAILHTHKAQVLKSPLDRMVSDYFERSVKALDVCNAIRDGVEQIRLWQKLLEIVLYALDQQRSLGEGQFRRAKKALIDLSISMLDDNKDSSAIAHRNRSFGRSNGGRDKDHNHHHSHGGNSHTSHGNNSYQHRSLGHFRSLSWSVSRNWSAARQLQAIGNNINPPKANDLMATNGLAMCVYIMNSILLFVMWALVAAIPCQDRGLQVHYSIPRSYTWSIPFLSLHERIMEESKKRDRKNACGLLREIQQIEKCVRVMSELADSVHFPLSEEKEGEVRQRVQEVSHVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGRPNNASE* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0854 410 MobiDBLite consensus disorder prediction 180 200 - -
Tpr1g0854 410 MobiDBLite consensus disorder prediction 180 212 - -
Tpr1g0854 410 PANTHER OS04G0688000 PROTEIN 1 407 - -
Tpr1g0854 410 PANTHER BPS1-LIKE PROTEIN 1 407 - -
Tpr1g0854 410 Coils Coil 407 410 - -
Tpr1g0854 410 Pfam Protein ROH1-like 15 402 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0854 Tpr-Chr1 7279986 7281977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0854 - - gmx:100818059 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0854 1 7279986 7281977 Tpr1g0854 1 7279986 7281977 ECH
Tpr2g0796 2 9680772 9682705 Tpr1g0854 1 7279986 7281977 PCT