Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0847 ATGGCGGATCGAGGAGAAGACGAGGATTTGCAAATGGCGATTCGGATGAGTATGACGCCGGAGCCGAAGCGCAATAAGCCGAGGGATGAAGTGGCCGGTGTGATTTCGGGGTTGCCGGAGGATTCTCCGGAATCTAAGACACGGAGACGGGAACTTATGGCAGCGGCTGCTGAGAAGCGGATGGCATCGATCATTCGGGTTTCGCCTTCGGCCTCGTCCCCGGCAACTAAAGGAGTAAAGAAGGAGGCTGAAGTTGTAAAGAGAGTGGAGGAATTGCCTCTCAGACATGAGAGTTTGAGTAAGGAGCTTTCCGCGGAAGAAGCTAATAAATTATTTGTAATGGTGTTTGGAAGTGAAGTTTCAAAGGATATTCTAGCACAGTGGTGTAACCAAGGAATAAGGTTTAGCTCTGATCCTGAAACATCAATGGGCCTAGTGCAGCATGAAGGAGGCCCCTGCGGCGTTTTGGCAGCTATACAAGCATTTGTGTTCAAATACATTATTTTCTTCAGTGATGAATTGAAAGAATCGCCACGCATGCCACAAAATCGGGGTCTAGGTGCTTCAAGTAAAAGTCACTCTGTTCCATCATATAATATTTCTTCACTCACTGAAGGTGTAAAAGTAAGAGCCCTTGTAAGAAGTATGGGTGAAATTTTGTTTTTATGTGGAAATAATAAAAGGGCTGTGATTGCAACTTTGAGCATTCCAGAGAATGATATTCAACGTTTTGAAGGAATCTCAGAGGAAGAGGTTATTGCAAGCTCACTTAAAGCTCTTTCTATTGAATCTGCCTTGGATCTGCTGAAAGTTCTTAGAGTTGAAACACACACATCAGAAACAACTGCTTTCCAGAGGCTTGAAGCACTTATTCCTGTATTTCAAAGTCGTATGGGGGCATTGCTTTTCCTAATCTCTGCTTTACTTTCTCGTGGATTGGATTTGGTTCAAAGTGACAGGGATGATCCCAGCCTACCGCTGGTTACTGCTCCTTTTGGCCATGCCTCCCAGGAAATTGTAAACCTACTACTCTGCGGGCAGGCTGTCCCTAATGTATTTGATGGAAGGATGGATTTAGGTGGGGGGATGTTTCTGAAAGGTATAGCCCGAAACGTGGAAGTTGGATTTCTCACCCTGCTAGAATCCCTGAATTTTTGCAAGGTTGGTCAGTTTCTGAAAACCCCAAAATGGCCAATATGGGTTGTTGGGAGTGAATCCCATTACACAGTGTTGTTTGCTCTTGATCCCAGTGTTCAAAATGAGAATGAACTTGAAGGAAGGGAAACACAGATTCGCAGAGCTTTTGATGCACAAGATCAAAGTGGAGGTGGTGGCTTCATTAGTGTGGAGGGGTTCCATCAAGTCATCAGAGAAACAAATATCAAACTTCCGGCAGATAAGCTAGATAACCTTTGCAGTGCAGGGTTCATTGTATGGAGTGAATTCTGGCAGGTAATTTTGGACCTAGACAAAAGCTTGGGAGGTTTGAAAGATTCATCAGGATTAATGGGTAAGAAGGTCTTTGATCTTTTCCATTTTAATGGGATTGCTAAATCAGATTTGAATGGAAGTCAAGTAAATGTTGGGGGTGAAACTCCACTGCAAAGACCCAGGCTCACAAAATTAAGCGTCTCGGTTCCCCCAAGGTGGACGCCTGAGGAGTTTATGGCAGATGTGCAAGGTCCATCTGCTTCTGGTGCAAGTGACTCTGCTGGGAAAGACACTGAGGTATCAAAACCAGAGCCTGTCCAGCATGCACCTTTGGTTGACTGCATAAGGACACGCTGGCCCCGTGCTGTCTGCAGCTGGTCAGGTGATCCTCCTAGTATAGTCTGA 1836 0.4532 MADRGEDEDLQMAIRMSMTPEPKRNKPRDEVAGVISGLPEDSPESKTRRRELMAAAAEKRMASIIRVSPSASSPATKGVKKEAEVVKRVEELPLRHESLSKELSAEEANKLFVMVFGSEVSKDILAQWCNQGIRFSSDPETSMGLVQHEGGPCGVLAAIQAFVFKYIIFFSDELKESPRMPQNRGLGASSKSHSVPSYNISSLTEGVKVRALVRSMGEILFLCGNNKRAVIATLSIPENDIQRFEGISEEEVIASSLKALSIESALDLLKVLRVETHTSETTAFQRLEALIPVFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGQAVPNVFDGRMDLGGGMFLKGIARNVEVGFLTLLESLNFCKVGQFLKTPKWPIWVVGSESHYTVLFALDPSVQNENELEGRETQIRRAFDAQDQSGGGGFISVEGFHQVIRETNIKLPADKLDNLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLFHFNGIAKSDLNGSQVNVGGETPLQRPRLTKLSVSVPPRWTPEEFMADVQGPSASGASDSAGKDTEVSKPEPVQHAPLVDCIRTRWPRAVCSWSGDPPSIV* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0847 611 MobiDBLite consensus disorder prediction 558 584 - -
Tpr1g0847 611 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 24 IPR003903 -
Tpr1g0847 611 SMART DUF4205_3 112 481 IPR025257 -
Tpr1g0847 611 MobiDBLite consensus disorder prediction 1 49 - -
Tpr1g0847 611 SUPERFAMILY EF-hand 427 487 IPR011992 -
Tpr1g0847 611 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 114 425 IPR025257 -
Tpr1g0847 611 PANTHER UNCHARACTERIZED 3 610 IPR039785 GO:0004843|GO:0071108|GO:1990380
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0847 Tpr-Chr1 7146252 7154564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0847 K22647 - gmx:100813222 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0847 1 7146252 7154564 Tpr1g0847 1 7146252 7154564 ECH