Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0830 ATGGAAGCTGTTTGTCTCAAATGTGGCGATTTAGGTTTCATAGAGGCGATTGTTTTTTGCAACAAGTGTCAGGCTTGTGCTCTGCATAGGTACTGTTTAGATGGACCTGTGATTTTTACTGATGATGTTATATGGTTTTGTGAGGATTGTGAACCAAACCCAGTAGTATCATATTCACTTAACCAATCTACGCTTCTGTCATCTAAAAATACCAACTCTTCAAATTTGGCCAACAATGCAATCCTATCCCAGAGAAAACTGGATTATTGTGTAACGAGATTGCAGAAAAGCCAACAACAGAATAAAAAGAAGAATGAAGAGAAGCAGAAGCAGAAGAAAGGAAAAGTTAACTCTGTCTTAGTTGCTGAAACAAAGGTCCTTTTATCTGACAGTCGCTGCTCAACCGAGGTTGAGTATCCTCAATGTAATATCAACCATGAACAAGAAAATAATTCTAAAATTTATTGTGGAACAGTTCCAACAGATGCTGAAAACTCCAATATGGGTCCTAAATCTGTTCAAATCTCTCAAGTAACTGCCACTGATGATTTAATAACATTAGATATTCCTGTTGATGCACAGCCTATTTCCGATCCAATCTGGAGGGGAGATTTGCTCTTCTGCAATAAAACTATTGGACTTCTGGCCCATTTGTCCAGTTTGGCATCCCCCAAAGTTCGGGAGGAGACAGAACTTTTCCCAGAAGTGCTTTCTGCTGAATTGCCTCCCAGATCTGCAGTGTGGCCTAATAGCTTCAAGAAGGAAGGACCAACTGATAAGAGCATTGCGCTTTATTTCTTTCCCAAGGACAAAAGATTGTCTATAAAGGCCTTTGACATGCTGGTTGATGATATCATTCGCACTGAAGCTGCCATAAGAGTTTTGACAAAAAATGCAATGCTTTTAATGTTTCCTTCCACCTTGCTTCCAATACAACATCAGAAATTTCAAACCAAGTATTACTTGTGGGGTGTCTTCAAAAAAAAGCAAACTTCAAAAGAGAAATGA 1008 0.3889 MEAVCLKCGDLGFIEAIVFCNKCQACALHRYCLDGPVIFTDDVIWFCEDCEPNPVVSYSLNQSTLLSSKNTNSSNLANNAILSQRKLDYCVTRLQKSQQQNKKKNEEKQKQKKGKVNSVLVAETKVLLSDSRCSTEVEYPQCNINHEQENNSKIYCGTVPTDAENSNMGPKSVQISQVTATDDLITLDIPVDAQPISDPIWRGDLLFCNKTIGLLAHLSSLASPKVREETELFPEVLSAELPPRSAVWPNSFKKEGPTDKSIALYFFPKDKRLSIKAFDMLVDDIIRTEAAIRVLTKNAMLLMFPSTLLPIQHQKFQTKYYLWGVFKKKQTSKEK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0830 335 MobiDBLite consensus disorder prediction 95 115 - -
Tpr1g0830 335 PANTHER OS12G0161900 PROTEIN 1 334 - -
Tpr1g0830 335 ProSitePatterns Zinc finger PHD-type signature. 5 50 IPR019786 -
Tpr1g0830 335 PANTHER - 1 334 - -
Tpr1g0830 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 76 IPR013083 -
Tpr1g0830 335 Coils Coil 94 114 - -
Tpr1g0830 335 SUPERFAMILY FYVE/PHD zinc finger 2 55 IPR011011 -
Tpr1g0830 335 MobiDBLite consensus disorder prediction 99 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0830 Tpr-Chr1 6914997 6918180 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0830 - - mtr:MTR_1g099270 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0830 1 6914997 6918180 Tpr1g0830 1 6914997 6918180 ECH
Tpr2g0765 2 9225522 9236775 Tpr1g0830 1 6914997 6918180 PCT