Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0823 ATGTCTCAGGCTGCGGCTACTCGATCCATTCAAACCTCTCTTTTACGACCCACTTCAGGATCTACACAAGAAAGGTCTCAAACCTTGTTAAAGCCTTCAACTTTTTCCTGCAAAGCTTTTCCATCACAGGGTAACAATATCCCCAACGTTTGCCTCAGAAACTCTCCAATCAATGCAAGAAAATCTGCATCTGCTGAAGTTGTTCCTGTTTCACCTGAAGATGATTCAAAGATTGAGGAGGAGTTGTTGAAGTTACGTGGTTTACAGCAATTTGGTGATGCTTCTGGTGGAATTTGGTCAAAGCCAACTGTTAGAAGGAAGACAAAGATTGTTTGTACTATTGGTCCTTCTACTAATACAAAGGAAATGATTTGGAAGTTGGCTGAAGCTGGAATGAATGTTGCTCGGTTGAATATGTCTCATGGAGATCATGCTTCTCATAAGAAAGTTATTGAGTTGGTTAAAGAATATAATGCACAATCTAAGGACAATGTAATTTCAATTATGCTTGATACCAAGGGTCCTGAGGTTAGGAGTGGGGATTTGCCACAGCCAATTTTGTTAAAAACTGGGCAGGAATTCACTTTTACTATCAAAAGTGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTATGATGATTTTGTCAATGATGTTGAAGAAGGGGATATGCTTCTTGTTGATGGTGGTATGATGTCTTTCTTGGTTAAGTCCAAAACTGCGGATACTGTGAAATGTGAAGTTATTGATGGAGGAGAGCTTGCATCAAGGAGACATTTGAATGTTAGAGGAAAGAGTGCAACATTGCCTTCGATCACTGAGAAGGATTGGGATGACATCAAATTTGGAGTGGATAATGAAGTTGATTTTTATGCCGTTTCTTTCGTTAAGGATGCACAAGTAGTTCACGAACTGAAGAATTATTTGAAAAGCCGTGGTGCTGATATTCATGTAATTGTAAAAATTGAAAGTGCAGACTCTATACCGAACTTGCATTCAATTATTACCGCATCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGTGCAGAACTCCCTATTGAGGAGGTTCCTCTTTTGCAGGAAGAGATAATTAGGATATGCCGTAGCATGGGAAAGGCTGTTATTGTGGCAACAAACATGCTGGAAAGCATGATTGTTCACCCGACACCAACCAGAGCCGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCAGATGGAATAATGCTTTCTGGAGAAACTGCTCATGGAAAGTTTCCAATAAAAGCTGCGAAAGTAATGCACACGGTAGCATTACGGACAGAAGCCGCTTTACCAAGTGGGCAGATGCCGCCACCTAATATTGGCCAAGTATTCAAGAACCACATGAGCGAGATGTTTGCATACCACGCAACCATGATGTCTAATACCCTTGGAACATCAACTGTTGTCTTCACTAGATCAGGCTTCATGGCTATTCTATTGAGCCATTATCGACCCTCAGGCACCATATTTGCATTTACTGATCAGAAAAGGGTACAACAAAGGTTGGCTTTGTATCAAGGAGTCTGTCCTATTTACATGGAATTCTCTGATGACTCGGAAGAGACATTCACAAAAGCCTTGGATTTGTTGCAGAAGAATGGAATGGTTAAAGAAGGAGAAGAAGTAGCCCTTGTACAAAGTGGAAGACAACCTATATGGAGGTTCCACTCCACTCACAATATCCAAGTCCGAACAGTAACTGCCACGAATTAA 1743 0.4114 MSQAAATRSIQTSLLRPTSGSTQERSQTLLKPSTFSCKAFPSQGNNIPNVCLRNSPINARKSASAEVVPVSPEDDSKIEEELLKLRGLQQFGDASGGIWSKPTVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHKKVIELVKEYNAQSKDNVISIMLDTKGPEVRSGDLPQPILLKTGQEFTFTIKSGVGTADCVSVNYDDFVNDVEEGDMLLVDGGMMSFLVKSKTADTVKCEVIDGGELASRRHLNVRGKSATLPSITEKDWDDIKFGVDNEVDFYAVSFVKDAQVVHELKNYLKSRGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPIKAAKVMHTVALRTEAALPSGQMPPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPSGTIFAFTDQKRVQQRLALYQGVCPIYMEFSDDSEETFTKALDLLQKNGMVKEGEEVALVQSGRQPIWRFHSTHNIQVRTVTATN* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0823 580 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Tpr1g0823 580 Gene3D - 108 433 IPR040442 -
Tpr1g0823 580 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Tpr1g0823 580 TIGRFAM pyruv_kin: pyruvate kinase 106 576 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 MobiDBLite consensus disorder prediction 1 28 - -
Tpr1g0823 580 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Tpr1g0823 580 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 99 440 IPR015813 GO:0003824
Tpr1g0823 580 PANTHER PYRUVATE KINASE 53 576 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr1g0823 580 PANTHER PLASTIDIAL PYRUVATE KINASE 2 53 576 - -
Tpr1g0823 580 Pfam Pyruvate kinase, alpha/beta domain 464 556 IPR015795 -
Tpr1g0823 580 Gene3D - 449 577 IPR036918 -
Tpr1g0823 580 SUPERFAMILY PK C-terminal domain-like 425 576 IPR036918 -
Tpr1g0823 580 Pfam Pyruvate kinase, barrel domain 106 442 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0823 Tpr-Chr1 6875199 6879621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0823 K00873 - gmx:100818193 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0823 1 6875199 6879621 Tpr1g0823 1 6875199 6879621 ECH
Tpr2g0756 2 9101917 9110688 Tpr1g0823 1 6875199 6879621 PCT