Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0810 ATGGAAGACCAACCATCACCACTTCCACCAAAAACATACAAACTAACAGCAACTTCAATCTCTTACTCCAAAAACCTACAAACAAACAACACTATCATTGCACCATTTCTCTTCTTCAAAAACTGTGCACCAATTCCACCAACTTACATCCTCAAAGATGTTTCACTCACAGCATACCCTTCTGAGATTCTTGCCATTGTTGGTCCAAGTGGTGCAGGAAAATCAACTCTTTTAGACATTCTTTCAGCTAGAAGATTACCCTTAAGTGGAACACTTTCCCTTAACTCTTCACCTATTAATAACCCTTCAACATTCAGAAAACTTTCTGCTTATGTTCCTCAACATGATGCATGTTTACCTATGTTAACTGTTTCTGAAACTTTTGCTTTCTCTGCTTCTCTTCTTAAGCCGAAAACTATCGATATTGCTTCGATTGTTTCGTCTCTTTTAAACGAGCTTAGACTAACTCATTTGGCTAATACAAGGCTTAATCATGGTTTATCTGGTGGCGAACGTAGAAGGGTCTCGATCGGACTAAGTCTTCTTCATGATCCTGCTGTTTTGCTACTTGATGAACCTACTTCTGGTCTTGATAGTTCATCTGCTTACAAAGTCATGCAAACTCTTAAATCAACTTGTGTTTCATATAATAGAACAATTGTTCTTTCAATTCATCAACCAAGTTTCAAGATTCTCTCTTGTATTGATAGAATCTTGCTTCTTTCAAAAGGAACTGTTGTTCATCATGGAAGCTTAGCTTCACTTCAAGCATTTTTGCATTCAAAAGGTTTCACTGTCCCTCATCAGCTTAATGCATTGGAATATGCAATGGAAATATTGAACCAATTGAATGAAATTAAACCAATGATTACTCCTCCAACTCCACCTGAATCACCTGAACAATCCTCACCAGAAAAATCTAAATCTACTATAGGTTGTAATTCTCTGTCTGAAAATATTGGAACTAGAACTAAAAATAGAGAAATCAGGTACAAAAGTTCAAGGATTCATGAAATTTGCACACTATATAGAAGATTTTGGAAGATCATATACAGAACAAGACAACTTCTGTTAACAAACACAGCAGAAGCACTTCTTGTTGGTCTTGTTTTAGGAACAATTTACATCAACATTGGATTTGATAAAGAAGGTATTGAGAAAAGGTTTGGTCTATTTGCATTCACTCTTACATTTCTACTATCTTCAACAACTGAAACACTTCCAATCTTTATCAATGAAAGACCAATCTTGTTAAGAGAAACATCAAGTGGTGTTTATAGGCTATCATCATATCTTATAGCAAACACACTTGTTTTCTTACCATATTTGCTAGTAGTAGCTGTTATTTACTCTATTCCAGTTTATTTCTTGGTTGGTCTTTGCAGTTCTTGGATATCTTTTTCTTACTTTGTTTTGGTCATTTGGGTGATTGTTCTTATGGCAAACTCATTTGTTCTGTTCTTGAGTTCTTTAGCACCAAACTACATTGCTGGAACTTCACTCATGACAGTGCTACTTGCAGCATTTTTTCTGTTTTCTGGTTACTTTATCTCTAAGGATTGTTTACCTAAGTATTGGCTTTTCATGCACTTCTTTTCTATGTACAAATATGCTCTTGATGCACTTCTTATCAATGAGTATTCTTGCTTAGTTAATAGGTGTTTTATATGGGTCCAAGAGAATGATCAAGAATGCATGATCACTGGTGGTGATGTGTTGCAGAAGAAAGGGCTCCATGAAGGACAAAGATGGATTAATGTTTACTTCTTGATTGGATTCTTTGTGTTTTATCGTGTGCTTTGTTTCTTGGTTTTACTTAGAAGGGTTTCAAGATCCAAAACTTGA 1845 0.3539 MEDQPSPLPPKTYKLTATSISYSKNLQTNNTIIAPFLFFKNCAPIPPTYILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSARRLPLSGTLSLNSSPINNPSTFRKLSAYVPQHDACLPMLTVSETFAFSASLLKPKTIDIASIVSSLLNELRLTHLANTRLNHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSSSAYKVMQTLKSTCVSYNRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQAFLHSKGFTVPHQLNALEYAMEILNQLNEIKPMITPPTPPESPEQSSPEKSKSTIGCNSLSENIGTRTKNREIRYKSSRIHEICTLYRRFWKIIYRTRQLLLTNTAEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLLVVAVIYSIPVYFLVGLCSSWISFSYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLMTVLLAAFFLFSGYFISKDCLPKYWLFMHFFSMYKYALDALLINEYSCLVNRCFIWVQENDQECMITGGDVLQKKGLHEGQRWINVYFLIGFFVFYRVLCFLVLLRRVSRSKT* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0810 614 MobiDBLite consensus disorder prediction 292 311 - -
Tpr1g0810 614 Pfam ABC-2 type transporter 225 284 IPR043926 GO:0140359
Tpr1g0810 614 Gene3D - 41 288 IPR027417 -
Tpr1g0810 614 Pfam ABC transporter 51 195 IPR003439 GO:0005524
Tpr1g0810 614 ProSitePatterns ABC transporters family signature. 167 181 IPR017871 GO:0005524
Tpr1g0810 614 Pfam ABC-2 type transporter 338 547 IPR013525 GO:0016020|GO:0140359
Tpr1g0810 614 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 5 609 - -
Tpr1g0810 614 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 609 - -
Tpr1g0810 614 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 268 IPR003439 GO:0005524
Tpr1g0810 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 255 IPR027417 -
Tpr1g0810 614 SMART AAA_5 60 245 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0810 Tpr-Chr1 6767343 6769649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0810 46 262 Calmodulin-binding Proteins AT2G36910 29.412 5.24e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0810 K05681 - gmx:100790712 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0810 1 6767343 6769649 Tpr1g0810 1 6767343 6769649 ECH