Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0800 ATGAAAGCAATCTCTAATATTTCAGGGGTTGAGTCAGTGTCTTTGGATATAAAGGAACATAAATTAACCTTAACTGGAGACATAGATCCTGTGGCTGTAGTTGGAAAGTTAAGGAAATTGTGTTGTCCTAAGATATTATCTGTTGGACCAGCAAAAGAGGCTAAGAAAGAAGAGAAGAAAAAGAAGGGTACAGAAGAGAAAAAGGATCAAAATAATAAGAACTCAGAAGCTGGTGTTGTGAAGATTTGTGAAGCTTATCATTATCCTATCATGATGAAACAACCACATTACTACTATACTAGTGTGGAAGAGAATCCTAGTGCATGTGTCATTTGCTAA 339 0.3569 MKAISNISGVESVSLDIKEHKLTLTGDIDPVAVVGKLRKLCCPKILSVGPAKEAKKEEKKKKGTEEKKDQNNKNSEAGVVKICEAYHYPIMMKQPHYYYTSVEENPSACVIC* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0800 112 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 112 - -
Tpr1g0800 112 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 112 - -
Tpr1g0800 112 Coils Coil 54 74 - -
Tpr1g0800 112 Pfam Heavy-metal-associated domain 1 39 IPR006121 GO:0046872
Tpr1g0800 112 MobiDBLite consensus disorder prediction 50 73 - -
Tpr1g0800 112 Gene3D - 1 54 - -
Tpr1g0800 112 SUPERFAMILY HMA, heavy metal-associated domain 2 41 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0800 Tpr-Chr1 6724843 6725593 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0800 - - cam:101510144 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0800 1 6724843 6725593 Tpr1g0800 1 6724843 6725593 ECH