Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0796 ATGAATAAAATAGTGCTGCAAGTGGAAATACATGATGACAAAACAAAGAAAAAAGCTATGAAAGCAATCTCTAATATTTCAGGGGTTGAGTCAGTGTCTTTGGATATAAAGGAACATAAATTAACCTTAACTGGAGACATAGATCCTGTGGCTGTAGTTGGAAAGTTAAGGAAATTGTGTTGTCCTAAGATATTATCTGTTGGACCAGCAAAAGAGGCTAAGAAAGAAGAGAAGAAAAAGAAGGGTACAGAAGAGAAAAAGGATCAAAATAATAAGAACTCAGAAGCTGGTGTTGTGAAGATTTGTGAAGCTTATCATTATCCTATCATGATGAAACAACCACATTACTACTATACTAGTGTGGAAGAGAATCCTAGTGCATGTGTCATTTGCTAA 396 0.3485 MNKIVLQVEIHDDKTKKKAMKAISNISGVESVSLDIKEHKLTLTGDIDPVAVVGKLRKLCCPKILSVGPAKEAKKEEKKKKGTEEKKDQNNKNSEAGVVKICEAYHYPIMMKQPHYYYTSVEENPSACVIC* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0796 131 Coils Coil 73 93 - -
Tpr1g0796 131 Pfam Heavy-metal-associated domain 6 58 IPR006121 GO:0046872
Tpr1g0796 131 MobiDBLite consensus disorder prediction 69 92 - -
Tpr1g0796 131 Gene3D - 1 73 - -
Tpr1g0796 131 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 131 - -
Tpr1g0796 131 SUPERFAMILY HMA, heavy metal-associated domain 4 60 IPR036163 GO:0046872
Tpr1g0796 131 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0796 Tpr-Chr1 6714083 6715584 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0796 - - cam:101510144 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0796 1 6714083 6715584 Tpr1g0796 1 6714083 6715584 ECH
Tpr2g4285 2 46203846 46205045 Tpr1g0796 1 6714083 6715584 PCT