Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0794 ATGAAGAAAGTTGTGCTAAAGTTGGATATACATGATGACAAAATCAAGCAAAAAGCTATGAAGGCAGTCTCTGGCCTTTCAGGGGTTGAATCAGTTTCAGTGGACATGAAAGACCAAAAATTAACCTTAATCGGAGATATTGATCCGGTACGCGTAGTGGCTAAGCTAAGGAAGATTTGCCATGCAGACATAGTTTCAGTTGGACCAGCTAAAGAAGAAAAGAAAGAAGAACCTAAAAAGAAGGAAGATGATAAGAAGGATTCAACAAAAAAAGAAATTGTGATTGATCCTTTCATGTTCTATGGAACACCAACATATGCTGCCTATTATAATCAGATTAAACCACAATATAATCCTTATTACAGGGCTGTAAGCGTTGAAGAGGATCCTAATGGTTGTGTCATCATCTAA 411 0.3698 MKKVVLKLDIHDDKIKQKAMKAVSGLSGVESVSVDMKDQKLTLIGDIDPVRVVAKLRKICHADIVSVGPAKEEKKEEPKKKEDDKKDSTKKEIVIDPFMFYGTPTYAAYYNQIKPQYNPYYRAVSVEEDPNGCVII* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0794 136 Pfam Heavy-metal-associated domain 9 59 IPR006121 GO:0046872
Tpr1g0794 136 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 136 - -
Tpr1g0794 136 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 136 - -
Tpr1g0794 136 Gene3D - 1 73 - -
Tpr1g0794 136 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
Tpr1g0794 136 MobiDBLite consensus disorder prediction 68 88 - -
Tpr1g0794 136 CDD HMA 21 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0794 Tpr-Chr1 6704777 6713015 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0794 - - var:108325259 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0794 1 6704777 6713015 Tpr1g0794 1 6704777 6713015 ECH
Tpr2g4284 2 46200842 46201711 Tpr1g0794 1 6704777 6713015 PCT
Tpr1g0794 1 6704777 6713015 Tpr2g4285 2 46203846 46205045 PCT