Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0793 ATGAAGAAAGTTGTGCTAAAGTTGGATATACATGATGACAAAATCAAGCAAAAAGCTATGAAGACAGTCTCTGGCATTTTAGGGGTTGAGTCAGTTTCAGTGGACATGAAAGACCAAAAATTAACCTTAATAGGTGATACTGATCCGGTGCGTGTAGTTGCTAAGCTAAGGAAGATTTGTCATGCAGACATGGTTTCAGTTGGACCAGCTAAAGAAGAAAAGAAAGAAGAACCTAAAAAGAAGGAAGATGATAAGAAGGATTCAACAAAAAAAGAAATTGTGATTGATCCTTTCATGTTCTATGGAACACCAACATATGCTTACTATAATCAGATGAAACCACAATATAATTATCCTTATTACGTTGAAGAGGATCCTAATGGTTGTGTCATCATCTAA 399 0.3534 MKKVVLKLDIHDDKIKQKAMKTVSGILGVESVSVDMKDQKLTLIGDTDPVRVVAKLRKICHADMVSVGPAKEEKKEEPKKKEDDKKDSTKKEIVIDPFMFYGTPTYAYYNQMKPQYNYPYYVEEDPNGCVII* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0793 132 Gene3D - 1 73 - -
Tpr1g0793 132 MobiDBLite consensus disorder prediction 67 88 - -
Tpr1g0793 132 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 132 - -
Tpr1g0793 132 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 132 - -
Tpr1g0793 132 Pfam Heavy-metal-associated domain 9 59 IPR006121 GO:0046872
Tpr1g0793 132 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0793 Tpr-Chr1 6701735 6702917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0793 - - var:108325259 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0793 1 6701735 6702917 Tpr2g4284 2 46200842 46201711 PCT