Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0779 ATGATGATGAAGAGCCACACATTCCTAAGGGTCATTTTTCTTTTGATGTTTCTTGGGTGGCTAACTGTTTGGATCTTGTTGCCTACAAAGATCTACAAAAACACATGGACTCCCAAACTTAAAAACAGCCTAAATTCTACATACTTCAGAGAGCAAGGGGTAAATCTACTGCTTTTCACATTCCCTATGATGTTCATTGGAGCTTTGAGTTGTATTTATCTCCATCTTCACAGGGAAAAAATAACACAAAAGTTACCCTCCACAAGTGGCGCTCTAAAAAGATGTTTATGTTACCTAAGACGACCATTCTTGGTGATGTCTCCAATTGGAATTGTTACATCTATGGAGCTTATTTTTGCATTCATGTTTGTTGCACTTTTGATATGGTCCCTTTCCAATTACTTGCATATTAGTTTTGGTAGTCTTCATATGCACAAACAAGGCGAGAAAGTATGGGAAGCAAAGTTGAGGAGTGTATCTTTAAGACTTGGGTACATAGGAAACATATGTTGGGCATTTCTGTTCTTTCCAGTGACAAGAGGGTCTTCTATTCTGCCTCTTGTTGGTCTGACATCTGAATCAAGCATCAAATACCATATTTGGCTTGGACATTTATCTATGGTTCTTTTTGGTGCACATACCATAGGTTTCATCATCTATTGGGCCATCACCAACCAAATGGTTGAGATGTTAGAGTGGAGCAAGACATATGTATCAAATGTAGGTGGAGAGATTGCAAGTTTAATAGCATTAGCAATGTGGATAACAAGCATTCCACGCATAAGACGTAAGATGTATGAAGTATTCTTCTACACTCACCATCTCTACATTCTCTATATCTTATTCTATGCCATCCATGTTGGTGTTGGATACATGTGCATGATTGCTCCTGGGATTTTCCTATTCCTCGTTGATAGACATCTTAGATTCTTACAATCTCGACAAAATGCTCGTTTACTATCAGCTCGTCTTTTACCTTGTGATGCACTTGAGCTCACCTTCTCCAAGAATCCTAGTTTATACTATAACCCCACAAGCTTGGTGTTCATAAATGTTCCAAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTTTCTTCTAGTAGTAATATGGAGACTAATTCTCTTAGTGTTATCATAAAAAATTTGGGTAGCTGGTCAAACAAGCTTTATCAGGAACTTTCTTCAACAACTTTGGATCATCTTAGTGTTTCGGTTGAAGGACCCTATGGACCACATACTTCACAATTTCTAAGGCATGAACAGATTGTGATGATAAGTGGTGGAAGTGGCATAACTCCTTTCATATCAATAATCAGAGATCTCATATTTCAAAGCCAACAACAAGAATTTCAACCTCCAAAACTCCTACTTGTTTGTATTTTTAAAAACTATGTTGATCTAACAATGTTAGATCTTATACTTCCATCTTCTGGTTCAACAACTCAAATCTCACAGCTCCAGTTACAAATTGAAGCTTACATTACAAGAGAAAAAGAAGAACCACCAAGAGATACTCAAAAACATATTCAAACAATATGGTTTAAACCAAACCTCTTAGACTCTCCTATCTCAGCTATATTAGGCCCAAATAACTGGTTATGGCTCAGTGCTATAATCACATCATCTTTCATCATGTTTCTCCTCATTTTAGGGATCGTTACTCGTTACTATATCTATCCAATTGAAAGTAACTCAGGTGAAGTTTATAATTGGACATTCAAGGTTATGTGGTTCATGTTTCTACTTTGTGCATGTATATGTTTATGTTCTAGTGCAATTTTTCTTTGGTGGAAGAGACAAAACAACACCTTAGAAAATAAGCAAATAATGAATGTAGAAGTTTCAACACCAACAAGATCACCAGGGTCATGGATTTATGGATCAGAAAGAGAACTTGAAAGTCTTCCTCATCAATCTTTAGTGCAAGCTACCAATGTACATTTTGGTGCAAGACCTGATCTCAAGAAAATTCTGTTTGAGTGTGAAGGCAAAGATGTTGGAGTTATGGTTTGTGGTCCAAGAAAATTGAGACATGAAGTTGCTAGAATTTGTGCTTCTGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTTAATTGGTGA 2109 0.3694 MMMKSHTFLRVIFLLMFLGWLTVWILLPTKIYKNTWTPKLKNSLNSTYFREQGVNLLLFTFPMMFIGALSCIYLHLHREKITQKLPSTSGALKRCLCYLRRPFLVMSPIGIVTSMELIFAFMFVALLIWSLSNYLHISFGSLHMHKQGEKVWEAKLRSVSLRLGYIGNICWAFLFFPVTRGSSILPLVGLTSESSIKYHIWLGHLSMVLFGAHTIGFIIYWAITNQMVEMLEWSKTYVSNVGGEIASLIALAMWITSIPRIRRKMYEVFFYTHHLYILYILFYAIHVGVGYMCMIAPGIFLFLVDRHLRFLQSRQNARLLSARLLPCDALELTFSKNPSLYYNPTSLVFINVPKVSKLQWHPFTVSSSSNMETNSLSVIIKNLGSWSNKLYQELSSTTLDHLSVSVEGPYGPHTSQFLRHEQIVMISGGSGITPFISIIRDLIFQSQQQEFQPPKLLLVCIFKNYVDLTMLDLILPSSGSTTQISQLQLQIEAYITREKEEPPRDTQKHIQTIWFKPNLLDSPISAILGPNNWLWLSAIITSSFIMFLLILGIVTRYYIYPIESNSGEVYNWTFKVMWFMFLLCACICLCSSAIFLWWKRQNNTLENKQIMNVEVSTPTRSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFECEGKDVGVMVCGPRKLRHEVARICASGLADNLHFESISFNW* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0779 702 Pfam Ferric reductase like transmembrane component 164 282 IPR013130 -
Tpr1g0779 702 Pfam Ferric reductase NAD binding domain 420 686 IPR013121 GO:0016491
Tpr1g0779 702 PRINTS Cytochrome B-245 heavy chain signature 241 264 IPR000778 GO:0016020|GO:0016491
Tpr1g0779 702 PRINTS Cytochrome B-245 heavy chain signature 266 286 IPR000778 GO:0016020|GO:0016491
Tpr1g0779 702 PRINTS Cytochrome B-245 heavy chain signature 618 636 IPR000778 GO:0016020|GO:0016491
Tpr1g0779 702 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 312 416 IPR017927 GO:0016491
Tpr1g0779 702 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 8 701 - -
Tpr1g0779 702 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 404 475 IPR039261 -
Tpr1g0779 702 SFLD Ferric reductase subgroup (FRE) 12 702 - -
Tpr1g0779 702 Pfam FAD-binding domain 316 413 IPR013112 GO:0016491
Tpr1g0779 702 Gene3D - 591 701 IPR039261 -
Tpr1g0779 702 Gene3D - 404 526 IPR039261 -
Tpr1g0779 702 PANTHER NADPH OXIDASE 8 701 - -
Tpr1g0779 702 CDD NOX_Duox_like_FAD_NADP 319 497 - -
Tpr1g0779 702 SFLD Ferric Reductase Domain 28 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0779 Tpr-Chr1 6587933 6593445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0779 2 702 Miscellaneous Gene Families AT5G23980 58.557 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0779 K00521 - gmx:112998154 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0779 1 6587933 6593445 Tpr1g0779 1 6587933 6593445 ECH