Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0763 ATGTCATTTATCTGTGGCTTGCCTCTTGTTGAGTGTGTGTATTGTCTAGCTTGCACTCGTTGGGCATGGAAAAGATGTCTCCATTCGGCAGGCCATGACAGTGAAACTTGGGGCTTTTCTACAATAGAAGAATTTGAGCCAGTCCCACGTCTTTGTCGCTATATTTTATCTGTGTATGAAGATGATCTTCGCAACCCTCTTTGGGAACCTCCTGGTGGCTATGGAATCAACCCTGATATGTTATTACTTAGAAAAACATATAAAGATACACTTGGCCGGGCTCCGCCTTATATATTGTATCTTGATCATGATCATGCTGATATAGTTCTTGCTATAAGGGGACTAAATTTAGCAAAGGAGAGTGACTATGCTGTTCTGCTTGATAATAAATTGGGGAAGAGAAAGTTTGATGGAGGTTATGTTCACAATGGGTTGTTAAAGGCGGCTGGTTGGGTTATGGATTCTGAGTGTGAAATTTTGAGGGAATTGGTAGAGAAATATCCAAATTATACTCTTACTTTTGCTGGACATTCCCTTGGATCGGGAGTAGCTGCAATGTTGAGCATGGTGGTTGTGCAGCATCGAGATAGACTTGGAAATATTGAAAGGAAGAGAGTCAGGTGCTATGCTATCGCGCCTGCTAGGTGTATGTCACTTAATTTGGCTGTCAGATATGCGGATGTCATAAACTCCGTTGTGCTTCAGGACGACTTCTTACCAAGAACAGCCACTCCGTTGGAAGATATATTCAAGTCTCTTTTCTGTTTGCCATGCTTATTGTGCTTGAGGTGCATGAGGGATACATGCATACCAGAGGAGAGGATGCTGAAAGATCCAAGGAGACTTTATGCACCTGGTCGCCTTTATCACATTGTTGAGAGAAAGCCTTTCAGATGTGGAAGGTTTCCTCCAGTTGTGAGAACAGCAGTGCCCGTAGATGGAAGGTTTGAGCATATAGTTCTTTCTTGCAATGCTACATCAGATCATGCCATTATTTGGATAGAGAAAGAAGCCCAAAGGGCTTTGAATTTGATGCTTGAGAAAGATAATACCATGGAAGTACCTGCAAAGCAAATCATGGAGCGTCAAGAAACAATGACAAGACACAGCCAAGAATACAGAGCAGCATTACAAAGAGCAAAAACGTTAGACGTTCCACATGCTTATGCACCACCATCAGAATATGGAACTTTTGATGAGGAGGGAGAGGAGAGTTCAAGGTCAGAAGCCGAGTCTTCTGTTAGTTCAACTACAAGGAGTAAGGCGGCCGAAAGCTGGGATGTATTGATCGAGCGCCTTTTTGATAAGGATGAGCATGGTCACATGGTGTTCAAGAGATGA 1341 0.4295 MSFICGLPLVECVYCLACTRWAWKRCLHSAGHDSETWGFSTIEEFEPVPRLCRYILSVYEDDLRNPLWEPPGGYGINPDMLLLRKTYKDTLGRAPPYILYLDHDHADIVLAIRGLNLAKESDYAVLLDNKLGKRKFDGGYVHNGLLKAAGWVMDSECEILRELVEKYPNYTLTFAGHSLGSGVAAMLSMVVVQHRDRLGNIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCLLCLRCMRDTCIPEERMLKDPRRLYAPGRLYHIVERKPFRCGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALNLMLEKDNTMEVPAKQIMERQETMTRHSQEYRAALQRAKTLDVPHAYAPPSEYGTFDEEGEESSRSEAESSVSSTTRSKAAESWDVLIERLFDKDEHGHMVFKR* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0763 446 MobiDBLite consensus disorder prediction 386 423 - -
Tpr1g0763 446 Gene3D alpha/beta hydrolase 41 252 IPR029058 -
Tpr1g0763 446 MobiDBLite consensus disorder prediction 409 423 - -
Tpr1g0763 446 CDD Lipase_3 44 241 - -
Tpr1g0763 446 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Tpr1g0763 446 SUPERFAMILY alpha/beta-Hydrolases 42 270 IPR029058 -
Tpr1g0763 446 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Tpr1g0763 446 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Tpr1g0763 446 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0763 Tpr-Chr1 6439683 6444100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0763 1 446 Miscellaneous Gene Families AT3G49050 71.398 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0763 - - mtr:MTR_1g100950 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0763 1 6439683 6444100 Tpr1g0763 1 6439683 6444100 ECH