Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0750 ATGGTGAGCCAAAAACAACGACTCGCTCGAAAACGATTCAAAGAAGAACACCCTGAAAACTTCCCCAAAGTAGAACCCACTCCACCAAAAGACCCATCAAAGAAAAAGAAGAACAAATTCAAACGCAAAAAACCCGATTCAAAAACCAAACCCTCCGGAAAACGTCCCCTTCGAGTTCCCGGTATGAAACCCGGTGACAGTTGTTTCATTTGCAAGGGATTAGATCATATTGCAAAGTTTTGTACTCAAAAAGCTGAATGGGAAAAGAATAAGATATGTTTGCGGTGTAGACGGCGAGGTCATAGAGCTCAGAATTGTCCTGATGGTTCTAAAGATGTTAAGAATTGTTATAATTGTGGTGATAATGATCATTCTCTTGCTAATTGTCCTCTTCCTCTTCAAGAAGGTGGAACAATGTTTGCTGAATGTTTTGTTTGTAATCAACAAGGACATTTGAGTAAAAATTGCCCTAAAAATACTCATGGAATTTATCCAAAGGGTGGTTGTTGTAAACTATGTGGTGGTGTGACACATTTGGCGAAGGACTGTCCTGACAAAGGGCAAAATGGATTTGGTGGTGGTCGTGCTAAAGGGCCTGCTAACGCATCATCTGGAATGGCTGTTAATGATGAATGTAAATTGAAGTTTCTAGAATTAAAGGCAAAGAGAAACTATCGTTATATTGTGTTTAAGATTGAGAACCAAGAAGTGGTATTGGAGAAACTTGGAGGTCCAGAACAAACCTATGAAGACTTTAGTGCATCTCTTCCTGCTGATGAGTGTCGTTATGCTGTCTTTGATTTTGATTTCACCACTGCTGAAAACTGCCAGAAAAGCAAGATTGTCTTCATTGCATGGTCTCCTGAGGTATCAAAGGTGAGGCATAAGATGGTATATGCTAGCACCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAAGTTGAGTTGCAAGCAACAGATGCTGGTGAAATGAGCTTGGATATCATAAAAGCACGTGCAGTATAA 1008 0.4018 MVSQKQRLARKRFKEEHPENFPKVEPTPPKDPSKKKKNKFKRKKPDSKTKPSGKRPLRVPGMKPGDSCFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCPDGSKDVKNCYNCGDNDHSLANCPLPLQEGGTMFAECFVCNQQGHLSKNCPKNTHGIYPKGGCCKLCGGVTHLAKDCPDKGQNGFGGGRAKGPANASSGMAVNDECKLKFLELKAKRNYRYIVFKIENQEVVLEKLGGPEQTYEDFSASLPADECRYAVFDFDFTTAENCQKSKIVFIAWSPEVSKVRHKMVYASTKDRFKRELDGIQVELQATDAGEMSLDIIKARAV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0750 335 MobiDBLite consensus disorder prediction 34 49 - -
Tpr1g0750 335 ProSiteProfiles Zinc finger CCHC-type profile. 93 108 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 PANTHER COFILIN-RELATED 169 334 IPR017904 GO:0015629|GO:0030042
Tpr1g0750 335 PANTHER COFILIN-RELATED 110 160 IPR017904 GO:0015629|GO:0030042
Tpr1g0750 335 CDD ADF_cofilin_like 204 334 IPR017904 GO:0015629|GO:0030042
Tpr1g0750 335 SUPERFAMILY Retrovirus zinc finger-like domains 110 160 IPR036875 GO:0003676|GO:0008270
Tpr1g0750 335 Pfam Zinc knuckle 143 158 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 Pfam Zinc knuckle 115 130 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 SMART c2hcfinal6 115 131 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 SMART c2hcfinal6 142 158 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 SMART c2hcfinal6 67 83 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 SMART c2hcfinal6 92 108 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 SMART c2hcfinal6 169 185 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 SMART adf_2 210 335 IPR002108 GO:0003779
Tpr1g0750 335 Gene3D - 62 111 - -
Tpr1g0750 335 ProSiteProfiles Zinc finger CCHC-type profile. 116 130 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 ProSiteProfiles Zinc finger CCHC-type profile. 143 158 IPR001878 GO:0003676|GO:0008270
Tpr1g0750 335 Pfam Cofilin/tropomyosin-type actin-binding protein 212 332 IPR002108 GO:0003779
Tpr1g0750 335 SUPERFAMILY Retrovirus zinc finger-like domains 61 109 IPR036875 GO:0003676|GO:0008270
Tpr1g0750 335 Gene3D Severin 196 335 IPR029006 -
Tpr1g0750 335 SUPERFAMILY Actin depolymerizing proteins 200 333 - -
Tpr1g0750 335 Gene3D - 112 163 - -
Tpr1g0750 335 MobiDBLite consensus disorder prediction 1 59 - -
Tpr1g0750 335 ProSiteProfiles ADF-H domain profile. 205 335 IPR002108 GO:0003779
Tpr1g0750 335 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 110 160 - -
Tpr1g0750 335 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 169 334 - -
Tpr1g0750 335 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0750 Tpr-Chr1 6334864 6349427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0750 - - cmo:103484078 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0750 1 6334864 6349427 Tpr1g0750 1 6334864 6349427 ECH