Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0738 ATGGATTCAAGAATTGTTCATAGCCATGTGCAAGATGAGAACGAGGAACAAAACTCACATAACATTGAATCACAACAAGTTACACTGACACATGGCGTAGAAGAGAACCAATCTTCTGATCATGAGAAGAAGTCTGTTCTGAATAAGGTGAAGGCAAAGGCTAAGAAAATTAAGGACACAATTAAGAAGCATGGTCAACAAGTACTTGATAATGGTAATGGACATAACAATCAAATTCAGCATACTCCTGATGATGATGATGGTGACTTGGATGATGATAAAGAAATTGTTCAAGACCGAGAACTTAATCAAGTACCAATTTATGACAGTGAAGATGTTAAAAGTCCTACATCTACACCTGAATCTGAGAAAGTTGAAAATTTAGGAAATTCAGGAATTGATATTGAAGGTACAAAAGTTAAGGGAGAAGAACCATATCATGATACACCAGTTGAAGGCGATTCTTTGATCACTGAAATCAATCAAAACATAGCCAATGACCAGGCCAAAACATTTCCTGTGGAAGAGAAGCCAGAGCAATACAAGGCCAATTTGGAGAAGCCAGCAATAGTCTTTGAGGAATATCCTCAAAAACAAGGAATTAAAACTGAGGAATATACTCTTCCAAATTATCAAATCAATCATACTGATCCAAGTGGTGCAGAAAATGATGAAATCAAAGACAATATTAAACCACTTGAAGAATCTCTTGAGAGAATAAATGTGCATGATGATGAACCAAAACTTACCAAAGAACCAAAAATCCAGTCATCTGTTGCTGATATTAAATACCCTCCTGAGGCATATACTCTTCTTGATGATCAAACCAAAGACACTCATCCAAATGAGGAAGGAAGTGATGAAGTAAAAGGCATTACACCACTTGAGGAATCTCTTGAGAGATTGAATGTGCATGATGAGTCAAAACCTACCACAGAACAAAAATTCCAGCCATCTGTTGCTGCTGACAATGAATACCCTCCTGCTGCTGTTGTCAGTCATGATCAGTTTGTGCCGGACCTCTCCGATGCAACAAAAACTCAGAATGAATATCCTCAAGAAACAGCATCCACTGATATCAATAGAGACTTTGAAATTCCCTCAGAAACTAGAGAACCTTTCAACAACATCACAACCACTGCTGATATACAACCTGGTTATGAAGAATCAGTGAAGACACAACCAAAGCACAAAAGTTACACAGATGAAATTGAAATCTCACAACCTGCAGAAGAAGTTGATACAACTATCCGTCCTGAAGATGATGAAGTTTCTAAGCTTGGTATTGATGAGAAAGGTGATGAACAAAAAAGTGAGAATGGAAAGAACATTGGTTATTCTCTTACTGAGAAATTGACTCCAGTTTATGGAAAGGTTGCTGAGGTAGGAAATGCAGTGAAATCCAAAGTTTATGGAACTAATGATGGAAGTGAAACAAAAAATGGGGACAAAGGGGTCACTGTGAAGGATTACTTGGCTGAGAAGCTAAAGCCTAGTGAAGAAGATAAGGCACTTTCTGAGGTGATTTCAGAAGCTTTGCATAAAGGGAAAGAAGATCCACTGAAGAAAGAGGATGGAAAAGTGGATAGTGAAGTTGAGAAGTCTGAGAAAGTGTTTGAAGATAGCAATGTGAATAGTCAAGGAAAAGGTGTAGTTGGCAAGGTTAAGGATGTTGTTGGCTCTTGGTTTGTAAAATCACCACAAGGTGGAGGAAGTGGTGAAGATTTATCAGAGAATAAAAAATCTGTTGGAGAAGTGGAACAAGTTGTGGATGAAGGAGGAAAACAAGAGTAA 1794 0.3785 MDSRIVHSHVQDENEEQNSHNIESQQVTLTHGVEENQSSDHEKKSVLNKVKAKAKKIKDTIKKHGQQVLDNGNGHNNQIQHTPDDDDGDLDDDKEIVQDRELNQVPIYDSEDVKSPTSTPESEKVENLGNSGIDIEGTKVKGEEPYHDTPVEGDSLITEINQNIANDQAKTFPVEEKPEQYKANLEKPAIVFEEYPQKQGIKTEEYTLPNYQINHTDPSGAENDEIKDNIKPLEESLERINVHDDEPKLTKEPKIQSSVADIKYPPEAYTLLDDQTKDTHPNEEGSDEVKGITPLEESLERLNVHDESKPTTEQKFQPSVAADNEYPPAAVVSHDQFVPDLSDATKTQNEYPQETASTDINRDFEIPSETREPFNNITTTADIQPGYEESVKTQPKHKSYTDEIEISQPAEEVDTTIRPEDDEVSKLGIDEKGDEQKSENGKNIGYSLTEKLTPVYGKVAEVGNAVKSKVYGTNDGSETKNGDKGVTVKDYLAEKLKPSEEDKALSEVISEALHKGKEDPLKKEDGKVDSEVEKSEKVFEDSNVNSQGKGVVGKVKDVVGSWFVKSPQGGGSGEDLSENKKSVGEVEQVVDEGGKQE* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0738 597 MobiDBLite consensus disorder prediction 391 405 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 514 545 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 466 487 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 514 540 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 20 34 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 1 146 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 564 597 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 1 19 - -
Tpr1g0738 597 Coils Coil 47 67 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 341 363 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 419 439 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 578 597 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 341 447 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 110 126 - -
Tpr1g0738 597 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 257 IPR037491 GO:0009737
Tpr1g0738 597 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 266 597 IPR037491 GO:0009737
Tpr1g0738 597 MobiDBLite consensus disorder prediction 371 387 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 273 312 - -
Tpr1g0738 597 PANTHER - 266 597 - -
Tpr1g0738 597 PANTHER - 1 257 - -
Tpr1g0738 597 MobiDBLite consensus disorder prediction 241 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0738 Tpr-Chr1 6246546 6249412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0738 - - cam:101500742 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0738 1 6246546 6249412 Tpr1g0738 1 6246546 6249412 ECH