Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0727 ATGGCCACCGTGCAGCTGTGGGAGACTCTCAAAGACTCCATCGTCGCCTACACCGGTCTATCTCCGACCACTTTCTTCACTCTCTTGGCTCTTCTATTTGCCTTTTACTACGTCGTTTCTGGTCTCTTTGGCTCCTCTTCTTCTAACCGTCACCACCAAACCCGCCACTTCCAAGAAGAGGAGCTTCCTCCTCTTCGACCCCCTGTTCAGCTAGGTGAAATCACCGAAGAACAACTCAAGGAATACGATGGCACCGATAATGATAAACCCTTGCTCATGGCTATTAAGGGTCAGATCTATGATGTGTCTCAGAGCAGGATGTTTTATGGACCCGGTGGACCTTATGCTTTATTTGCTGGGAAGGATGCTAGTAGAGCTTTAGCAAAGATGTCGTTTGAAGAGAAAGATCTGACTGGGGATATTTCTGGTCTTGGCCCATTTGAGCGCGACGCATTACAGGACTGGGAATACAAGTTTATGGAGAAGTATGTAAAGGTTGGAACTATTAAAAAGGAAGTTCCAGTTACTGATGCTGAATCCAGCGGCGAACCATCAGAATCTACTCCCCGCGATGTTGATGCTGTTAAGCCAACTAAAGATGACAAATCAGAAACTGCTGCAGCTGTTAAAAGTGATGAAACCCCTTCAAATGTTGAAGCCGATAAAGAGTAA 672 0.4613 MATVQLWETLKDSIVAYTGLSPTTFFTLLALLFAFYYVVSGLFGSSSSNRHHQTRHFQEEELPPLRPPVQLGEITEEQLKEYDGTDNDKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFERDALQDWEYKFMEKYVKVGTIKKEVPVTDAESSGEPSESTPRDVDAVKPTKDDKSETAAAVKSDETPSNVEADKE* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0727 223 MobiDBLite consensus disorder prediction 184 208 - -
Tpr1g0727 223 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 65 170 IPR036400 -
Tpr1g0727 223 Pfam Cytochrome b5-like Heme/Steroid binding domain 75 169 IPR001199 -
Tpr1g0727 223 Gene3D - 72 170 IPR036400 -
Tpr1g0727 223 MobiDBLite consensus disorder prediction 173 223 - -
Tpr1g0727 223 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 4 218 - -
Tpr1g0727 223 PANTHER CYTOCHROME B5-LIKE HEME/STEROID-BINDING DOMAIN PROTEIN 4 218 - -
Tpr1g0727 223 SMART Cyt_b5_2 74 170 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0727 Tpr-Chr1 6162431 6164778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0727 K17278 - gmx:100791779 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0727 1 6162431 6164778 Tpr1g0727 1 6162431 6164778 ECH
Tpr2g4363 2 47453903 47458747 Tpr1g0727 1 6162431 6164778 PCT