Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0711 ATGGATTCATCATCATCTTATTCACGTATCAACAAATCCACAAAACCTTCTTTTTCATCATCCATGAAAAAAACTCATCTTTACGTTCTCCTCGTTTTTCTCTGCGGAGCCTTTTATCTCCTAGGCGCATATCAACAACGTGCACCATACACCACCACCACCCCAACCGAAAAAACCATCATAACAACAACACCATGCAACTATCCAAATCCCCAAACTACCCTCAATTTTCAATCAAATCACAGCGCCACAACCACCGAAACAACTGAAACAACAACAATCGTCTTCCCTCGATGTACCGCGAATTTCAGCGAATACACACCGTGTGAAGATCCAACAAGATCGTTAAGGTATAAACGTAGTAGAATGATATATAGAGAAAGACACTGTCCAATTAAAGGAGAAGAGGATTTGAAGTGTAGAGTTCCGCCGCCGTATGGTTATCGGAATCCCTTTCCGTGGCCAGCAAGTAGAGATGTTGCTTGGTATGCAAATGTACCTCACCGTGAACTTACGGTTGAAAAAGCAGTTCAGAATTGGATCCGTTATGACGGTGATAGGTTCTTTTTTCCCGGCGGTGGAACTATGTTTCCTAATGGTGCTGATGCTTACATTGATGATATCGGAAAGTTGATAAATCTTAAAGATGGTTCTATTAGGACTGCTCTTGATACTGGCTGTGGGGTTGCTAGCTGGGGTGCATATCTTGCATCACGTAACATAATAACATTATCAATAGCACCAAGGGATACACATGAAGCACAAGTTCAGTTTGCTCTAGAACGAGGTGTTCCTGCAATGATTGGTGTCTTAGCCTCCAAGAGATTACCTTTTCCTTCAAGAGCTTTTGACATTTCCCACTGCTCTCGTTGCTTAATTCCATGGGCTGAATATGATGGCATTTTTCTCAATGAAGTCGATCGAGTTTTGCGCCCGGGTGGTTACTGGATTTTATCTGGACCACCAATTAATTGGAAGAAACACTGGAGAGGATGGCAGAGAACAAAGAAGGATTTGAATGAAGAACAGACCAAAATTGAAAAGGTTGCTAAAAGTCTTTGTTGGACTAAGTTAACTGAGAAAGATGATCTTGCTATTTGGCAGAAACCCAAAAACCATTTAGATTGCAAATCCGCGCGTAAGCTCGCTACAAGCCGCCCCTTTTGCAGTGCACAAGATAGTCCTGACAGTGCCTGGTATACTGATTTGAAAACATGTTTGAGTCCTGTTCCTGAAGTTTCCAACAAAGAAGAAACTGCTGGTGGGATATTGGAGAATTGGCCACAGAGACTTGAGTCTGTTCCACCAAGGATTCACAAGGGTACTATTGAAGGGGTTACTTCTGAAACTTTTTCTAAAGATTATGAGCTTTGGAAGAAAAGAGTGTCACATTATAAGAAAGTGAATAATCAACTAGGAACTACAAGATACCGTAACATTTTGGATATGAATGCTAACTTGGGTGGATTTGCATCTGTTTTAATTAAGGATCCTGTTTGGGTCATGAATGTGGTTCCTGTTCAAGCTAGTGTTAATACACTTGGAGCAATATATGAAAGGGGATTGATTGGAATATATCATGATTGGTGTGAAGCAGTGTCTACTTATCCAAGAACCTATGATTTAATTCATGCTGATTCACTGTTCAGCCTTTACAATGGCAGATGTGAATTGAAAGACATAATGCTAGAAATGGATAGGATTCTTAGACCTGAAGGAGCAGTAATAATCAGAGATGATGTTGATGTATTGTTGAAAGTAAAGAACATTGGCAATGGATTAGAATGGGATAGTGTTATTGTAGATCATGAAGATGGACCACTTCAAAGGGAGAAGCTTCTATTTGCTGTCAAGAAGTATTGGACTGCTCCTGCTGCTTCCGACAAGACTAATTAA 1896 0.4051 MDSSSSYSRINKSTKPSFSSSMKKTHLYVLLVFLCGAFYLLGAYQQRAPYTTTTPTEKTIITTTPCNYPNPQTTLNFQSNHSATTTETTETTTIVFPRCTANFSEYTPCEDPTRSLRYKRSRMIYRERHCPIKGEEDLKCRVPPPYGYRNPFPWPASRDVAWYANVPHRELTVEKAVQNWIRYDGDRFFFPGGGTMFPNGADAYIDDIGKLINLKDGSIRTALDTGCGVASWGAYLASRNIITLSIAPRDTHEAQVQFALERGVPAMIGVLASKRLPFPSRAFDISHCSRCLIPWAEYDGIFLNEVDRVLRPGGYWILSGPPINWKKHWRGWQRTKKDLNEEQTKIEKVAKSLCWTKLTEKDDLAIWQKPKNHLDCKSARKLATSRPFCSAQDSPDSAWYTDLKTCLSPVPEVSNKEETAGGILENWPQRLESVPPRIHKGTIEGVTSETFSKDYELWKKRVSHYKKVNNQLGTTRYRNILDMNANLGGFASVLIKDPVWVMNVVPVQASVNTLGAIYERGLIGIYHDWCEAVSTYPRTYDLIHADSLFSLYNGRCELKDIMLEMDRILRPEGAVIIRDDVDVLLKVKNIGNGLEWDSVIVDHEDGPLQREKLLFAVKKYWTAPAASDKTN* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0711 631 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 105 618 IPR004159 GO:0008168
Tpr1g0711 631 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 455 581 IPR029063 -
Tpr1g0711 631 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 330 IPR029063 -
Tpr1g0711 631 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 17 625 IPR004159 GO:0008168
Tpr1g0711 631 Gene3D Vaccinia Virus protein VP39 183 368 IPR029063 -
Tpr1g0711 631 PANTHER METHYLTRANSFERASE PMT20-RELATED 17 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0711 Tpr-Chr1 6037376 6041013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0711 - - gmx:100778314 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0711 1 6037376 6041013 Tpr2g4347 2 47240505 47248955 ECH
Tpr1g0711 1 6037376 6041013 Tpr1g0711 1 6037376 6041013 ECH