Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0699 ATGGGCTACTCTAGAGGTGATTCAGCATCATGGTATTGTGCAATAGCGTTATTGGGTATAATATTGTTAGGATCAATAAGAGAAAGTACTGTGGCTGAATTAGAAGAAGTAAGAGGGAACCACCTTAATGATCACAAAGCATGTGACGAGATATATGTGGTTGGAGAAGGTGAAACACTAAACACAATCAGTGAAAAATGTGGTGACCCGTATATTGTGGAGCGGAATCCACATATCCATGACCCGGATGATGTTTTCCCTGGTCTTGTCATCAGAATCATCACACCAAACAATACTAGGAAATTGTTGAAGACATAG 318 0.3994 MGYSRGDSASWYCAIALLGIILLGSIRESTVAELEEVRGNHLNDHKACDEIYVVGEGETLNTISEKCGDPYIVERNPHIHDPDDVFPGLVIRIITPNNTRKLLKT* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0699 105 CDD LysM 51 93 IPR018392 -
Tpr1g0699 105 Gene3D LysM domain 43 102 IPR036779 -
Tpr1g0699 105 PANTHER LYSM DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 6 104 - -
Tpr1g0699 105 Pfam LysM domain 52 93 IPR018392 -
Tpr1g0699 105 PANTHER EMBRYO SAC 1 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0699 Tpr-Chr1 5931504 5932285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0699 - - qsu:112037248 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0699 1 5931504 5932285 Tpr1g0699 1 5931504 5932285 ECH