Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0698 ATGGGTTGGTTCTTGGCACAATATATATGGGCATTTCTTGCTGGAAGCTTGTTCTTTAATGGTTTATCTTATTCTTATAAAGCTCCAATGTACACATTTATCAAAGAAGCAACATTTGCTCCTCCAATCTTAAGATATGACTATATAGTAATAGGTGGAGGATCATGTGGTTGTCCACTAGCAGCAACACTTTCACATGGTGGAGAAGTTTTAGTCCTTGAAAGAGGAGGTTCACCATATACAAATCCAGAACAAATCAAGATAAATAAGTTTGTTCATGCTCTTGTTAACACAAGCCTTTCATCATTTTCCCAACAATTCATATCAACCGACGGTGTCCTCAATGCTCGTGCTCGCGTCTTAGGCGGTGGTTCTGTCTTGAATGCTGGATTCTACTCAAGGGCTAGCAATAGGTACATAAGTGAAACTGGTTGGAATGAAACTTTGGCTGAGAGTGCATATGAATGGGTTGAAAATAAAGTTGCTTTTGAGCCTCCAATAATGCAATGGCAATCAGCAGTGAGGGATGGTTTACTTGAAGCAGGGGTTTTGCCTTACAATGGTTTTACTTTTGATCATTTATATGGGACTAAGGTTGGAGGGTCAATTTTTGATAAGGAGGGTCATAGACACACTGCAGCTGATTTGTTAGAGTATGCTTATCCAACAAGAATTTCTGTTTATTTGCATGCCACAGTGCAGAAGATACTGTTTAAGTATAACGCAGAAAAAAATAGGCCACAAGCTTATGGAGTGATATTCAAAGATGCATTGGGAATCATACATAGAGCATACATAAGCTCCAATGTGAAGAATGAAATAATAGTATCAGCTGGTGCAATTGGAAGTCCACAGTTACTGATGCTGAGTGGTATTGGTCCAGCTAAACATCTTAAGGCACATGGAATCAAAGTAGTTTTGGATCAGCCTTTGGTTGGTCAAGGAATGGCAGATAATCCAATGAATATTCTATTTGTTCCTTCTCCTTTACCTGTTGAACTTTCTCTCGTTCAAACAGTTGGAATCACTAAGAATGGCAGCTTCATTGAAGCAGTTAGTGGATTAAACCTTGGTCTTTCTTGGTTTGACAGGCTTAGAGGGATTTTTGAATTGGTGTCAAACCAGAGTGGCCTACCGCACAAGTTCGCACCAGAAACCATGAAAAGTTTTGCAAACATAATTCGATCATTAGACAATTCAACTCTCAAAGGAGGAGTCATACTAGAAAAGATAAGAGGACCAAGATCAACAGGTCACTTAGAACTCCTAACAACTAATCCCAATGATAATCCATCAGTTACATTTAACTATTTCAAAGATCCAGAAGACTTGAGAATGTGTGTGGAAGGCATGAAAACCATCATAAATGTGATAAACTCAAAAGCATTCTCAAGATTCCGGTATCCCAACATGTCTGTACAAGCTCTAATAGATTGGATGTTATACGTGCCAGTGAATTTTAGGCCAAAACATCGCAATGCTTCATTTTCTTTGGAACAATATTGCATTGACACTGTCTTAACAATTTGGCATTATCATGGAGGTTGCCAATATGGTAAAGTTGTTGATCATAATTATAAAGTCATTGGTGTCGAAGCTCTTAGAGTAATTGATGGATCGACTTTTTATCGCTCACCAGGGACTAACCCTCAAGCTACTGTAATGATGCTTGGAAGGTACATGGGACAAAAGATTATAAAGAAAAGACTCTCTCAGGAGGAAGTGAAGTGA 1731 0.3859 MGWFLAQYIWAFLAGSLFFNGLSYSYKAPMYTFIKEATFAPPILRYDYIVIGGGSCGCPLAATLSHGGEVLVLERGGSPYTNPEQIKINKFVHALVNTSLSSFSQQFISTDGVLNARARVLGGGSVLNAGFYSRASNRYISETGWNETLAESAYEWVENKVAFEPPIMQWQSAVRDGLLEAGVLPYNGFTFDHLYGTKVGGSIFDKEGHRHTAADLLEYAYPTRISVYLHATVQKILFKYNAEKNRPQAYGVIFKDALGIIHRAYISSNVKNEIIVSAGAIGSPQLLMLSGIGPAKHLKAHGIKVVLDQPLVGQGMADNPMNILFVPSPLPVELSLVQTVGITKNGSFIEAVSGLNLGLSWFDRLRGIFELVSNQSGLPHKFAPETMKSFANIIRSLDNSTLKGGVILEKIRGPRSTGHLELLTTNPNDNPSVTFNYFKDPEDLRMCVEGMKTIINVINSKAFSRFRYPNMSVQALIDWMLYVPVNFRPKHRNASFSLEQYCIDTVLTIWHYHGGCQYGKVVDHNYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGQKIIKKRLSQEEVK* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0698 576 Gene3D - 46 558 IPR036188 -
Tpr1g0698 576 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Tpr1g0698 576 Gene3D - 163 508 - -
Tpr1g0698 576 SUPERFAMILY FAD/NAD(P)-binding domain 44 568 IPR036188 -
Tpr1g0698 576 PIRSF Alcohol_oxidase 32 576 IPR012132 GO:0050660
Tpr1g0698 576 SUPERFAMILY FAD-linked reductases, C-terminal domain 316 515 - -
Tpr1g0698 576 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
Tpr1g0698 576 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 4 569 - -
Tpr1g0698 576 Pfam GMC oxidoreductase 46 320 IPR000172 GO:0016614|GO:0050660
Tpr1g0698 576 ProSitePatterns GMC oxidoreductases signature 1. 118 141 IPR000172 GO:0016614|GO:0050660
Tpr1g0698 576 PANTHER OSJNBA0019K04.7 PROTEIN 4 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0698 Tpr-Chr1 5924543 5927692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0698 7 569 Miscellaneous Gene Families AT5G51950 60.315 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0698 - - gmx:100780453 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0698 1 5924543 5927692 Tpr1g0698 1 5924543 5927692 ECH