Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0691 ATGGCACAGTTTACCCCCTCAGGTAAATCTGATGATATTGCATCAGAAGGATGCAACGAAACAAGTGATCTGGTTGTTTGTTTTGGTGAACTGTTAATAGATTTCGTGCCAACGGAAGGTGGAGTGTCTCTAGCTGAAGCGCCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCGAACGTGGCAGTTGGCATCTCTAAGTTGGGGGGTTCATCTGCATTTATAGGCAAGGTCGGAGCAGATGAATTTGGGTATATGTTGGCTGATATTTTAAAGCAAAATAAGGTCGATATATCTGGTATGCGGTATGATTCTAATGCAAGAACTGCATTGGCTTTTGTTACACTTAGAGCTGATGGCGAGCGCGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTGGATAAGTCAGAGCTTGATCGAAACCTCATTGTGAAGGCTAAAATATTCCATTATGGTTCCATCAGTTTGATTGACGAGCCATGCAAATCAGCTCATCTCGATGCTTTGAGAATTGCTAAAGAGTCTGATTGCATCCTCTCATATGATCCGAATTTGAGATTGGCACTATGGCCATCAGCTGAGGCTGCTCGGGATGGTATAATGAGCATATGGGAACTAGCCGATGTCATAAAGATCAGTGAAGAAGAGATCACCTTTTTGACTGGTGGTGATGATCCTTATGATGATGATGTTGTATTAAATAAGCTTTTTCACCCTCATATCAAGCTTCTAATTGTTACCGAAGGGTCAGAGGGTTGTAGATATTATACCAAGGATTTTAAGGGCAGAGTTGCAGGTGTCAAAGCTAAACCTGTTGACACAACTGGTGCTGGTGACGCCTTTGTTAGTGGGTTTCTGTACAACTTAGCTTCTGACCCAAGTATACTCGAGAACGAGGAGCATCTGCGAAAAGCGCTATATTTCGCCAATGTATGTGGTGCGATCACGGTGACAGAGAGAGGGGCAATTCCTGCACTACCTACAAAAGACGCCGTCCTGCAATTTGATGCAAAATAG 1026 0.4366 MAQFTPSGKSDDIASEGCNETSDLVVCFGELLIDFVPTEGGVSLAEAPAFKKAPGGAPANVAVGISKLGGSSAFIGKVGADEFGYMLADILKQNKVDISGMRYDSNARTALAFVTLRADGEREFLFFRNPSADMLLDKSELDRNLIVKAKIFHYGSISLIDEPCKSAHLDALRIAKESDCILSYDPNLRLALWPSAEAARDGIMSIWELADVIKISEEEITFLTGGDDPYDDDVVLNKLFHPHIKLLIVTEGSEGCRYYTKDFKGRVAGVKAKPVDTTGAGDAFVSGFLYNLASDPSILENEEHLRKALYFANVCGAITVTERGAIPALPTKDAVLQFDAK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0691 341 CDD bac_FRK 24 326 - -
Tpr1g0691 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Tpr1g0691 341 PANTHER CARBOHYDRATE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 14 339 - -
Tpr1g0691 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Tpr1g0691 341 PANTHER HEXOKINASE FAMILY MEMBER 14 339 - -
Tpr1g0691 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Tpr1g0691 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Tpr1g0691 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Tpr1g0691 341 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Tpr1g0691 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Tpr1g0691 341 Gene3D - 21 341 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0691 Tpr-Chr1 5867706 5871336 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0691 K00847 - gmx:100818404 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0691 1 5867706 5871336 Tpr1g0691 1 5867706 5871336 ECH