Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr1g0675 | ATGAAAGAGATCCTTTTTCTTCTTCTTCTTCTTCTTGTTGTGCTCTCGTTGGCCTTTCAATTGACCCTCTCAGTCGCAGTGTTTGACTCCCAATCTGCTTCTCTACTGCCTCATGCTCATGAATCCTTCAATATCAGTTATATTCAGATGAAGAACGCTGCAAGTTGTTCTTACTTGGTGGTTATATCTACTAGTTGTTCATCTCCTAGGTATACAACGGATCAAATCAGTATTGCTTTTGGAGATGCTTATGGAAATCAGATATACTCACCAAGATTGGATGATCCATCTTCTGGTACATTTGAGAGCTGTTCTTCAGATACATTTCAGATAAATGGTCCATGCGCATATCAGATATGCTATGTCTACCTCTATAGATCTGGCTCAAGTGGTTGGAAACCCGACACTGTGAAAATCAATGGTTATAATGGCAGACCTGTTACTTTCTACTACAACACTTTCATTCCCAGAGATACTTGGTATGGGTTTGATTTGTGCAACAATGCTGCTTCTTCATACAAAGTAACTGCTCAGAAATGTCTATTATTAGTAATTCTGGGATTTGTTCTAAGTTTTTTGTTGTAA | 585 | 0.3829 | MKEILFLLLLLLVVLSLAFQLTLSVAVFDSQSASLLPHAHESFNISYIQMKNAASCSYLVVISTSCSSPRYTTDQISIAFGDAYGNQIYSPRLDDPSSGTFESCSSDTFQINGPCAYQICYVYLYRSGSSGWKPDTVKINGYNGRPVTFYYNTFIPRDTWYGFDLCNNAASSYKVTAQKCLLLVILGFVLSFLL* | 195 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr1g0675 | 194 | CDD | PLAT | 56 | 167 | - | - | |
| Tpr1g0675 | 194 | Pfam | Embryo-specific protein 3, (ATS3) | 48 | 166 | IPR010417 | - | |
| Tpr1g0675 | 194 | Gene3D | PLAT/LH2 domain | 53 | 163 | - | - | |
| Tpr1g0675 | 194 | PANTHER | EMBRYO-SPECIFIC PROTEIN ATS3B | 11 | 193 | - | - | |
| Tpr1g0675 | 194 | PANTHER | - | 11 | 193 | - | - | |
| Tpr1g0675 | 194 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 55 | 163 | IPR036392 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr1g0675 | Tpr-Chr1 | 5694306 | 5696361 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr1g0675 | - | - | gmx:100499692 | 293.123 |
Event-related genes