Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0673 ATGAATTCTCTTATAGCAATACTTCGACCGCTTTTCTCCTTTCAAAATCCTCGCGCATGGATTCTCTTCACCGTCATGTTCATCCAGATCCTTCTCTTCTTCAACCTCCGTAGCTTCCCCACCTCAATTTCACGCCCTCACCACCAATTTCCTAGTCGCCGCGCCGTAATCCAAACAGCTGCCACTCAAAATGCCATGGTATTGGATTCTTATTCTAAATCTACTCCCACTACCACTACCAACGACGATCAATGCGCCTCCGGTAAGGTTTTTGTCTACGACCTTCCCAAATTCTTCAACCAAGAAATCCTCGATAATTGTGACAATCTCAATCCATGGAGTTCTCGCTGTGATGCTCTATCAAATGACGGATTAGGACAGAGCGCAACCGGACTCGCTGGAATTATCCCGAAAAATCTTCTTCCGGCGTGGTACTGGACAGACCAATTCGTTTTAGAAATCATTTTCCATAAACGTATTCTTAACCACAAGTGCAGAACCTTAGAGCCAGAATCCGCTGCAGCGTTCTACATACCATCCTATGTTGGACTCGCAGTGGGAAAGTATTTATGGATGAACACCTCCACAACAAAAGATTGCGATCATCACTGTGAGATGATGCTGACGTGGCTTCAAGAACAACCATATTACAAAAAATCCAACGGTTGGGACCATTTTATAACAATGGGACGCATCACATGGGATTTTCGTCGCGCCAAAGATGAAGATTGGGGTTCTAGTTGCATCAACAAGCCAGGGTTAAGAAACATCACGCGCCTTATCATAGAGCGTAACCCGTGGGACTATTTCGATGTTGGTGTTCCCTACCCCACTGGATTCCATCCTAATTCCTCTTCTGATGTCACTCTATGGCAGAGCTTTGTCCGCGATCGCCGTCGCACCTCGCTTTTCTGCTTCGTCGGAGCTCCACGTCGTGCCTTCAAGAATGATTTCAGAGCAATTCTATTGAATCAGTGTCGTGACTCCGATGGGTCGTGCCGCATCGTTGATTGCGCTGGGTCACAATGCGCGGATGGCACATCAGCAATCACTGAAACCTTTCTCGACTCTGATTTTTGTTTGCAGCCGAGAGGGGATAGTTTCACGCGCCGGTCTATTTTCGATTGTATGATTGCTGGTTCGATTCCGGTTTTTTTCTGGCGGCGAACCGCATATTTACAATATCAGAATTTTTTACCTAATGAACCGGGGAGTTACTCGGTTTATATAGACCGGAATGCAGTTATAAACGGGACATCGGTGGTAAAAGCCGTGCTCGAGAGTTACACGAAAGAAGAGGTGAAAAAAATGAGGGAAAAAGTGATCGAGTACATTCCTAGGATGGTTTATGCAAAATATAACAAAGGGATTGAGGGTATTAAGGATGCATTTGATTATGCAATTGATGGAGTATTAACAAGGTTCAAGGAACAACTACAACCTGAGTTTCATAAGTGGAAATAA 1464 0.4495 MNSLIAILRPLFSFQNPRAWILFTVMFIQILLFFNLRSFPTSISRPHHQFPSRRAVIQTAATQNAMVLDSYSKSTPTTTTNDDQCASGKVFVYDLPKFFNQEILDNCDNLNPWSSRCDALSNDGLGQSATGLAGIIPKNLLPAWYWTDQFVLEIIFHKRILNHKCRTLEPESAAAFYIPSYVGLAVGKYLWMNTSTTKDCDHHCEMMLTWLQEQPYYKKSNGWDHFITMGRITWDFRRAKDEDWGSSCINKPGLRNITRLIIERNPWDYFDVGVPYPTGFHPNSSSDVTLWQSFVRDRRRTSLFCFVGAPRRAFKNDFRAILLNQCRDSDGSCRIVDCAGSQCADGTSAITETFLDSDFCLQPRGDSFTRRSIFDCMIAGSIPVFFWRRTAYLQYQNFLPNEPGSYSVYIDRNAVINGTSVVKAVLESYTKEEVKKMREKVIEYIPRMVYAKYNKGIEGIKDAFDYAIDGVLTRFKEQLQPEFHKWK* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0673 487 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 8 478 - -
Tpr1g0673 487 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 8 478 IPR004263 GO:0006486|GO:0016757
Tpr1g0673 487 Pfam Exostosin family 85 423 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0673 Tpr-Chr1 5663437 5664983 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0673 - - gsj:114403132 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0673 1 5663437 5664983 Tpr1g0673 1 5663437 5664983 ECH