Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0671 ATGGAGAACACAGTTGTTAAACTTCGATGCCAAAGGATTGGTTGCGATGCTATGTTCACCGAAGACGACAATCTCGATGGTTCCTGTCAATACCATGATTCGGGACCTGTATTTCATGATGGGATGAAAGCATGGAGTTGCTGCAAGAAAAAAAGTCACGATTTCAGCTTATTTTTACAAATTCCAGGGTGTAAGAAGGGAAAACATACGACAGAGAAGCAAGTAATTGCACCGGCTAAGAAAAAGCCCGTGCCCCCTCCAACTGCAGCTGCAGCTCCCTCAACCAATGGCTATCCATCGATGAAGGACTCTTGTTCTAGGTGTCGGCAGGGTTTCTTTTGCTCAGATCATGGTTCACAAAGCAAACCTGTAACTATTGTTGAAGAGAAACCTGTAAATCTTGCTGGAGATGCATCTGCAGAAAACAATTCAAGCCTTGAGGTTCCAAAACTTCCTAAAAAGATAGTTGGTATAAATGAGCCGCAAGTATGCAAAAATAAAGGATGCGGTCAAACTTTCAAGGAAAAAGATAATCATGAAACTGCTTGCAGTTACCATCCTGGCCCTGCTGTTTTTCACGACCGGATGAGAGGGTGGAAGTGCTGTGATGTTCATGTAAAAGAATTTGACGAGTTTATAACCATTCCTCCTTGCGCAAAGGGATGGCATAATGCCGATCCAGTGTCCTGA 690 0.4348 MENTVVKLRCQRIGCDAMFTEDDNLDGSCQYHDSGPVFHDGMKAWSCCKKKSHDFSLFLQIPGCKKGKHTTEKQVIAPAKKKPVPPPTAAAAPSTNGYPSMKDSCSRCRQGFFCSDHGSQSKPVTIVEEKPVNLAGDASAENNSSLEVPKLPKKIVGINEPQVCKNKGCGQTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDVHVKEFDEFITIPPCAKGWHNADPVS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0671 229 ProSiteProfiles CHORD domain profile. 164 223 IPR007051 -
Tpr1g0671 229 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 228 IPR043316 -
Tpr1g0671 229 Pfam CHORD 9 69 IPR007051 -
Tpr1g0671 229 Pfam CHORD 163 223 IPR007051 -
Tpr1g0671 229 Gene3D - 2 73 - -
Tpr1g0671 229 Gene3D - 156 226 - -
Tpr1g0671 229 ProSiteProfiles CHORD domain profile. 10 69 IPR007051 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0671 K13458 - gmx:100194419 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0671 1 5651801 5655356 Tpr1g0671 1 5651801 5655356 ECH