Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0505 ATGAAACTCAGACTCAGATCATTAGAATCCAAAGAAACCCTAAAAATCGAAGTGCCAGATCCATGTTCTATTAACCAACTCAAATCCACTATTTCTCAAACCATCCCTTCTCCTTCATCATCTTCTTCTCTTCATCTATCTCTCAACAGAAAAGACGAAATCAACGCCTCCTCTCTTAACGATAACGAATCCCTCAACTCACTCGGCATCGCCTCCGGCGATCTCATCTTCTACACCTTCAACCCCAACGTTTTCTCCATTGAAACCCTCCCTCAAAAACCCACCCCACAACAACAAACCAACAACCCACCCATCATTCAAAACTCCCCGGAAATCACCATGACTGACGCTCATTCGACTCCCGTGATAGAAAAGTTTCCAACTTTGGAAACCCCAGAACCGCAAATCACAGAAATGATCGATGGGTCTGATGAGGCGGCGTTGGCCATGAAGAACAGTCAAGAACCTGATTTTGTGAAAAGGGTGATTAGAGAAGCGCTTGGAGATGATGTTAACGATTTCAAGCTACTGGTATTTGCTGTTCATGCTGTTATTCTTGAATCTGGGTTTGTTCGTGTTGATCAAGTTTCGGGTATGGCGATTAGTTGCTCTCATCTTGTTGATGGAATGTCCTCTTCTTCAATGATATCTTTGAGGTATACTCTTCCTGAGATTCTTACTAATGCTAATGGTTTATCTCATTCTGTGAATTTGAAAATTCAGACATTAGGGAATTTTGTGAATGTTTATGGTTCTTTGTCTGATGATGTTGGTTCAAGGGTGCATAGGGTTTATTTAGATAAATGTAGATTTGCTAGGCCTTTAGAGTTGATGCTGTCAAATTCTGAATCTAATGATAGTGTTAGTGTTAATGATGATGGAGATGAGGTTTTTGAATTGTGGAAGATAGTGAAAGATAGGCTTGTATTGCCACTTTTAATTGACCTTTGTGATAAAGCTGGATTGGATCTTCCGCCGTGTTTTATGCGGCTTCCCATGGAACTTAAGCTATTGATATTTGAGTATCTTCCTGGTGATGATTTGGCCAAAGTGTGTTGCACATGTTCTGAATTGCAATATCTTGCCTCAAATGATGAGTTGTGGAAGAAGAAGTTTGAGGAGGAGTTTGGACAAGGGACGAATGGTATGAAGTTTTTTAAGAACTTGTTTGCTTTTTACCGGGCAACAAAGAAGAAAGCAGAGGAACCGCGTCCTTTTAGAGTTCCTCGAACTGGTATCATGAGATACTTTCAAAGGAGGAGAGGTGCTAATCGTTTTGGAATGCCTCCAATTTGGGGTGGAGAGTATGATCTGCAGCCAAATTTTGGTGTAAATTTCCCTGGATACACACGAAGGCGGGCTTTCATTCCCCCATGTAATCTGGGAGGATTTTAA 1395 0.4115 MKLRLRSLESKETLKIEVPDPCSINQLKSTISQTIPSPSSSSSLHLSLNRKDEINASSLNDNESLNSLGIASGDLIFYTFNPNVFSIETLPQKPTPQQQTNNPPIIQNSPEITMTDAHSTPVIEKFPTLETPEPQITEMIDGSDEAALAMKNSQEPDFVKRVIREALGDDVNDFKLLVFAVHAVILESGFVRVDQVSGMAISCSHLVDGMSSSSMISLRYTLPEILTNANGLSHSVNLKIQTLGNFVNVYGSLSDDVGSRVHRVYLDKCRFARPLELMLSNSESNDSVSVNDDGDEVFELWKIVKDRLVLPLLIDLCDKAGLDLPPCFMRLPMELKLLIFEYLPGDDLAKVCCTCSELQYLASNDELWKKKFEEEFGQGTNGMKFFKNLFAFYRATKKKAEEPRPFRVPRTGIMRYFQRRRGANRFGMPPIWGGEYDLQPNFGVNFPGYTRRRAFIPPCNLGGF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0505 464 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Tpr1g0505 464 PANTHER F-BOX PROTEIN SKIP22 1 464 - -
Tpr1g0505 464 Pfam F-box-like 330 370 IPR001810 GO:0005515
Tpr1g0505 464 Gene3D - 153 328 - -
Tpr1g0505 464 SUPERFAMILY F-box domain 325 383 IPR036047 GO:0005515
Tpr1g0505 464 SUPERFAMILY Ubiquitin-like 1 77 IPR029071 -
Tpr1g0505 464 Gene3D - 329 417 - -
Tpr1g0505 464 Gene3D - 1 89 - -
Tpr1g0505 464 ProSiteProfiles F-box domain profile. 325 371 IPR001810 GO:0005515
Tpr1g0505 464 SMART fbox_2 331 371 IPR001810 GO:0005515
Tpr1g0505 464 PANTHER F-BOX PROTEIN SKIP22 1 464 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0505 K10293 - gmx:100796338 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0505 1 4250318 4252154 Tpr1g0505 1 4250318 4252154 ECH