Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0498 ATGGCAGCCGGTGAAGGTGGTGGTGGTGGAGGAGGTGGAAAGGTTGATGAGTTTCAACCTCATCCTGTCAAGGAACAACTTCCTGGTGTTGATTACTGCATTAGAAGCTCACCTTCATGGCCTGAAGCGATTTTTCTTGGGTTTCAACACTACCTTGTCATGCTTGGAACCATTGTGATTATTTCAACCTTACTTGTTCCTTTGATGGGTGGTGGAAATGTGGAAAAAGCTCAAATGATCCAGACAATGCTTTTGGTTGCTGGAATCAAAACATTGTTGCAAACTTTGGTTGGAACTAGACTTCCTGTGGTTATAGGACCTTCCTTTGCTTTCCTTATACCAGCTATTTCTGTTGCTTTCTCAACTAGAATGAGCACATTCCTTAATCCTAATCAGAGGTTCAAGCAATCCATCAGAGCTGTACAAGGTGCTTTGATAATTGCTTCTTTTGTTCAAGCCATGATTGGATTTTTTGGGTTCTGGAGTATTTTTACAAGGTTTCTAAGCCCTCTAAGTGCCGTTCCACTTGTTACTCTTACTGGCTTAGGACTCTTTGTATTATGGTTTCCAAGATTGGCTGATTGTGTTGAAATTGGTCTCCCTGCATTGGTCATTCTGGTCATCCTGTCCCAATACATTCCACAAAAGATGAAATCAAGAGGTTTCGATCGAGTTGCAATAGTAGTCACAATTGGAATTGCATGGACATTTGCTGAAATTTTGACTGCAGCTGGTGCATATAACAAAAGACCACCAATGACTCAAATCAACTGCCGTACTGACCGATCTGGGTTGATTACCGCCGCTTCTTGGATAAAAGTTCCATATCCATTGCAATGGGGAAGTCCTACTTTCAATGCTGGTGATATATTTGCAATGATTGCTGCTTCTCTTGTTGCTATTGTAGAGTCAACCGGAACATTCATTGCGGCATCGAGGTTTGGCAGTGCAACACCAGTTCCACCTTCTGTGCTTAGCCGCGGCGTTGGCTGGCTGGGTGTAGGCACTTTTCTGGATGGCCTTTTTGGCGCAGCTACTGGATCTGCTGCATCAGTCCAAAATGCAGGACTGTTGGGTCTAACACGCGTTGGGAGTCGAAGAGTCATTCAAATATCAGCTGGATTCATGTTTTTCTTCTCTATATTTGGCAAATTTGGAGCAGTGATTGCTGCAATACCATTGCCAATAATAGCAGCTGTATATTGCGTCCTCTTTGCTTATGTCGCATCGGCCGGACTTGGTTTTCTTCAATTTTGCAATCTTAACAGCTACAGATCGATGTTCATCGTTGGCTTTTCTCTCTTTCTCGGTCTATCCATTCCACAATATTTCAACCAGACTATCGTTCTATCTGGACACGGCCCTGTTCAAACTGGCTCCACCTCGTTCAACAATATAGTGCAAGTAATTTTCTCATCTCCAGCTACTGTGGCGATTATAGTTGCTTACTTCTTGGATGCCACAATGAGTCCTGCACATGCCTCAACTCGCCGAGATAGTGGGAGACACTGGTGGGAAAAATTCAGGAGCTACAATCAGGATATCAGAAGTGATGAGTTCTATGCATTGCCTATGAGACTTAACAGATTTTTCCCTTCACACTGA 1605 0.4343 MAAGEGGGGGGGGKVDEFQPHPVKEQLPGVDYCIRSSPSWPEAIFLGFQHYLVMLGTIVIISTLLVPLMGGGNVEKAQMIQTMLLVAGIKTLLQTLVGTRLPVVIGPSFAFLIPAISVAFSTRMSTFLNPNQRFKQSIRAVQGALIIASFVQAMIGFFGFWSIFTRFLSPLSAVPLVTLTGLGLFVLWFPRLADCVEIGLPALVILVILSQYIPQKMKSRGFDRVAIVVTIGIAWTFAEILTAAGAYNKRPPMTQINCRTDRSGLITAASWIKVPYPLQWGSPTFNAGDIFAMIAASLVAIVESTGTFIAASRFGSATPVPPSVLSRGVGWLGVGTFLDGLFGAATGSAASVQNAGLLGLTRVGSRRVIQISAGFMFFFSIFGKFGAVIAAIPLPIIAAVYCVLFAYVASAGLGFLQFCNLNSYRSMFIVGFSLFLGLSIPQYFNQTIVLSGHGPVQTGSTSFNNIVQVIFSSPATVAIIVAYFLDATMSPAHASTRRDSGRHWWEKFRSYNQDIRSDEFYALPMRLNRFFPSH* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0498 534 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 6 533 - -
Tpr1g0498 534 Pfam Permease family 42 444 IPR006043 GO:0016020|GO:0022857|GO:0055085
Tpr1g0498 534 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED 6 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0498 Tpr-Chr1 4197477 4202405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0498 14 533 Organic Solute Cotransporters AT1G49960 66.667 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0498 - K23717 gmx:100820533 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0498 1 4197477 4202405 Tpr1g0498 1 4197477 4202405 ECH