Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0477 ATGGTGGCTGCCATTTCACAAAACCCATTAACAACCTCTTCTTCAAGAACTTCCGACAAAGACATCATCAACAACAACAATGGTGTCTTACCCAGAAAAAAAGGTAGACAAATTTCTTCAAGGTATATGTCACCTTCACCTTCAACTTCAACAACAACAACAACATCATCGTCAACAACAACAACAACTACAACAACAACAACATCTTCATCTTCTTCTTCTAGAAGATTTGCTTCACCCCTTTTGTCTCGTTCGACGAATTCATCATCAACACCACTTGTTGCTCCTAAACGTTCTCAGTCGGTGGACCGTAGGAGACCTCGACCAACAACCCCAGTTCCTGAAGCAACAAAGCTTCTAGTAACTTCTACTAGGAGTTTGTCTGTTTCTTTTCAAGGTGAGGCTTTTTCACTTCCTATTAGTAAGAGTAAAGCTAAAGCTGTTACGCCGGAGCGACGGAGGGTTACTCCAGTCGCCGGTAAAGGAGATCAGGGTGAAAACTCGAGACCCTCAGATCAACATCGGTGGCCGGCTCGGTCGAGACAGCCGAATCATTTGTCGAGGAGTGTTGATTGTAGTAGTGGTGGTGTTGGTGGTGGTGGTGGTGATGGGGAGAAGAAGAAGGTTGTTGGAAAAGTTGTGCGTGCATTGCAACAATCAATGGTTATGGAGAGTGGTAGAAGAAGAGCTTCTTTTGATGGATTAGGTGGTTTGAGTTTGGATTTAGGGAAAACTACTCAATTGAGTAATGAATCTTCTTTGAATTATGATGTTAATGCTTCTGATACTGATAGTGTTTCATCTGGTAGTAATTCAGGAGTACATGATTCTTCTCTTGGGACTCTTAAGGTTCCGAGGGAAAATCGTGGCATTGTTGTTTCTTCAAAGTTTTGGCAGGAAACTAATAGCCGGTTGCGTCGGTTACAGGATCCTGGTTCACCTTTGTCAACTAGTCCTGCTTCAAGAAGTAGTGTTCCACCTAAGAATTCTCAATTGAAAAGGTATAATAGTGATGGTCCTGTGTTATCACCTCGAACAACGGCTTCTCCTATAAGGGGAAATGCACGGCCTGCTTCTCCGAGTAAACTTTGGGCATCTGCTGCATCGTCGCCATCAAGGGGGTTTACTAGTCCTTCTAAGGTGAGAAGTGCGGTTGCTAGCTCTATCAATAGTAATTCTGGTAATTCGCCTTCGATTCTTAGCTTCTCGGCTGATGTGAGGAGAGGGAAGATAGGGGAAGATCGGATATTTGATGCGCATACTTTGAGGCTTCTTTATAATCGGTATGTGCAGTGGCGGTTTGTCAATGCTAGGGCTGATGCTACATTCATGGTGCAGAAATTGAATGCAGAGAGACATTTGTGGAATGCATGGGTAACAATCTCAGAGCTTCGGCATTCCGTCATACTTAAAAGAATCAAACTGTTATTGCTGAGGCAAAAGTTGAAGCTCACTTCTATTCTAAAGGGACAGATTTCGTATTTGGAAGAATGGTCCCTTCTAGATAGAGATCACTCCAGTTCTTTACTTGGAGCAACTGAAGCTTTGAAGGCCAGTACCCTCCGTCTTCCAGTTGTTAAAGCAACAGCCGATGTACCAAATCTGAAGGATGCTTTGGGATCCGCAGTTGATGTGATGCAAGCAATGGCATCGTCAATATATTCTCTTTCGTCAAAGCAGGTGGAAGAAACTAATTGCTTGGTAGCGGAAATCCTAAAGGTAACTTCAAAGGAAAGATATTTGCTTCAGCAATGCAAGGATTTTTTGTCTTCCTTAGCAGCCATGCAGGTCAAGGATTGTAGCTTAAGAACACATATGTTACAACTTTCTCGTGTACCAGCAGCTTCCTGA 1851 0.4322 MVAAISQNPLTTSSSRTSDKDIINNNNGVLPRKKGRQISSRYMSPSPSTSTTTTTSSSTTTTTTTTTTSSSSSSRRFASPLLSRSTNSSSTPLVAPKRSQSVDRRRPRPTTPVPEATKLLVTSTRSLSVSFQGEAFSLPISKSKAKAVTPERRRVTPVAGKGDQGENSRPSDQHRWPARSRQPNHLSRSVDCSSGGVGGGGGDGEKKKVVGKVVRALQQSMVMESGRRRASFDGLGGLSLDLGKTTQLSNESSLNYDVNASDTDSVSSGSNSGVHDSSLGTLKVPRENRGIVVSSKFWQETNSRLRRLQDPGSPLSTSPASRSSVPPKNSQLKRYNSDGPVLSPRTTASPIRGNARPASPSKLWASAASSPSRGFTSPSKVRSAVASSINSNSGNSPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYVQWRFVNARADATFMVQKLNAERHLWNAWVTISELRHSVILKRIKLLLLRQKLKLTSILKGQISYLEEWSLLDRDHSSSLLGATEALKASTLRLPVVKATADVPNLKDALGSAVDVMQAMASSIYSLSSKQVEETNCLVAEILKVTSKERYLLQQCKDFLSSLAAMQVKDCSLRTHMLQLSRVPAAS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0477 616 MobiDBLite consensus disorder prediction 261 282 - -
Tpr1g0477 616 MobiDBLite consensus disorder prediction 261 278 - -
Tpr1g0477 616 Pfam QWRF family 265 583 IPR007573 -
Tpr1g0477 616 MobiDBLite consensus disorder prediction 303 354 - -
Tpr1g0477 616 MobiDBLite consensus disorder prediction 1 97 - -
Tpr1g0477 616 MobiDBLite consensus disorder prediction 303 369 - -
Tpr1g0477 616 PANTHER QWRF MOTIF-CONTAINING PROTEIN 2 1 612 - -
Tpr1g0477 616 MobiDBLite consensus disorder prediction 1 119 - -
Tpr1g0477 616 PANTHER AUGMIN FAMILY MEMBER 1 612 - -
Tpr1g0477 616 MobiDBLite consensus disorder prediction 143 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0477 Tpr-Chr1 4019142 4025377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0477 - - gmx:100808920 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0477 1 4019142 4025377 Tpr1g0477 1 4019142 4025377 ECH