Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0475 ATGACGGTACCGAAACGTAACTATACTCGAATAAATGCTTTGGAGCTGAAAGCTCTAATTATTCGGAAGGTTGGTCGTCAGAGAGCTGGCAAGTACTTTGATCAGCTTGGAAAATTGGTTAGTTCAAAGATCAGCAAGACTGAGTTTAACAAGATTTGCATCTTGACAATTGGGAAGGAAAATATCCCTCTTCACAATCAACTAATCAAAGCAATTCTCAACAATGTTTGTCTGGCTAAAGTCCCACCTCTTAGAGGTGCTGCAAAAATAGGGAGTTTGAATGCTAAAGATCCAAATCAGCAGCAGACCAAATCAATGCAAATGCGGTATGGGGACGCGTTTCCTCCTTCCCTACGGAAGGGTGGTTCTTTTGCTACCCATGAAGGGAGGCTTGCTGGTCGTCAAAATGTGTTGGGACAATTAGGGAAGCCCCGAAACCCTGCATCCAAGGATTTTATCTATAAGACTCCAGAGCAGCAGAGTGCAACAGAACTGAATTCACTTGGCAGCAGACCTCCTATTTCCGTTGAAGATGGAGAAGAGGTCGAACAGATTGCTGGAAGCCCAAGCATTCAAAGTAGGAGCCCAGTTACAGCTCCCCTTGGGATATCCATGAATTTCGGTTATGGACGTAGCCCTCTTTCTAATGCATCATCATGCAGAAAGTATCCTCCAGAGACCTGTTACAACAATGGATATCTCCCCGACACATCATCACTGAGGAGTCGTTTGGAGCAAAAGTTGGAGAAGGAGGGTTTAACTGCGACAGTTGATTGTGTCAATCTATTGAATAATGCACTGGATTCTTATATGAAGAGGTTGATTGAATCCTCTACGGGTTTATCTGGGCCGAGAATCGGAAATGAGCACCGAAGACAACAAAATGGACAGTCTCTAGCTGGTTCAAATATACTGCAACCCAGAAGATATATTCAAACAGCAACGCAATCTTCCAGGGCATCTCTCCTGGATTTTCGTGTTGCAATGGAATTGAATCCACAGTCTCTTGGACCAGATTGGCCGACACAGCTTGAGAAGATTTGTATACGTGCTTCTGAAGAATGA 1065 0.4404 MTVPKRNYTRINALELKALIIRKVGRQRAGKYFDQLGKLVSSKISKTEFNKICILTIGKENIPLHNQLIKAILNNVCLAKVPPLRGAAKIGSLNAKDPNQQQTKSMQMRYGDAFPPSLRKGGSFATHEGRLAGRQNVLGQLGKPRNPASKDFIYKTPEQQSATELNSLGSRPPISVEDGEEVEQIAGSPSIQSRSPVTAPLGISMNFGYGRSPLSNASSCRKYPPETCYNNGYLPDTSSLRSRLEQKLEKEGLTATVDCVNLLNNALDSYMKRLIESSTGLSGPRIGNEHRRQQNGQSLAGSNILQPRRYIQTATQSSRASLLDFRVAMELNPQSLGPDWPTQLEKICIRASEE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0475 354 MobiDBLite consensus disorder prediction 279 304 - -
Tpr1g0475 354 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 8 280 IPR024738 GO:0070461
Tpr1g0475 354 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 354 - -
Tpr1g0475 354 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 354 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0475 Tpr-Chr1 4002500 4004489 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0475 - - gmx:100817344 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0475 1 4002500 4004489 Tpr1g0475 1 4002500 4004489 ECH