Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0474 ATGAGCAGCAGCACTTTCATGAAGAGCCGTTCTAAGGTTTCTGATTTCATGATGATGCAGAAACAATTAATGTTCGCAAACAATTCCACCATTAATCAAATCAAACTTCACTCTCTTCTCTCTAACAAACAACACTCAAAACCTTACTTTCGATTACCACATTTCTTCACCAAAAATACAACAACCACACAACAATATCAAATTATTCCTCCACCTTCTTTGTTTTCTTCATCGTTTTGTTCTTCTTCTTCTTCTTCTTCAACTGCTTCTGTTTCCAAACTTCGTTTTGTTGGTTGGTATTTGGGGATGATTAAGTCACACCCTATTCTCACTAAAAGTGTTACTTCTGCTCTCATTTATACCGCTGCTGATTTATCCTCTCAGACTATTGAGTGGCAATCTTCAAAATCCCTTGATTTTATAAGGACTTTACGCATGGCGGGATATGGGATGATCATTTTAGGACCAACACTGCATTTCTGGTTCAATTTTGTGTCAAAGCTTTTCCCAGGGAGGGATCTTTTCTCTACATTGAAGAAAATGGTCATGGGCCAGTCGATTTATGGACCTGCCATGACTGTTATTTTCTTCTCCTTGAATGCAGCTTTGCAAGGTGAAAACGACAAAGAGATTGTTGCACGTTTAAAGCGTGATCTTGTTCCTACACTGTTAAATGGAGTCATGTATTGGCCTATATGTGATTTTATTACTTTTAGATTCATCCCAGTTCATTTGCAGCCATTAGTCAGCAATTCATTTTCGTACTTGTGGACCATTTACATGACCTACATGGCGAGTCTAGAGAAAGCCGAGACAGATAGCTGA 825 0.3842 MSSSTFMKSRSKVSDFMMMQKQLMFANNSTINQIKLHSLLSNKQHSKPYFRLPHFFTKNTTTTQQYQIIPPPSLFSSSFCSSSSSSSTASVSKLRFVGWYLGMIKSHPILTKSVTSALIYTAADLSSQTIEWQSSKSLDFIRTLRMAGYGMIILGPTLHFWFNFVSKLFPGRDLFSTLKKMVMGQSIYGPAMTVIFFSLNAALQGENDKEIVARLKRDLVPTLLNGVMYWPICDFITFRFIPVHLQPLVSNSFSYLWTIYMTYMASLEKAETDS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0474 274 Pfam Mpv17 / PMP22 family 202 261 IPR007248 GO:0016021
Tpr1g0474 274 PANTHER OS12G0508100 PROTEIN 7 272 - -
Tpr1g0474 274 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 7 272 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0474 Tpr-Chr1 3996747 4000054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0474 93 269 Miscellaneous Gene Families AT2G14860 74.576 2.15e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0474 K13348 - gmx:100816797 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0474 1 3996747 4000054 Tpr1g0474 1 3996747 4000054 ECH