Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0472 ATGGCACCTTTGATAATGATTCCCCTCTCTCTCTTATTTCTACTTCTTCTCCAATTTCCTTTCCAAACCATCTCAATCAACTCTGAAGGGAATACTCTTCATGCTTTGAAGATCAGACTTTCTGACCCCAACAATGTTCTTCAGAGCTGGGACCCAACTTTGGTTAATCCATGTACTTGGTTTCATGTTACATGTGACATCAACAATCATGTCACTCGTTTAGACTTGGGAAATGCTAATGTTTCTGGAACCTTGGGCTCAGAACTTGGCCACCTACACCATCTACAGTATCTGGAGTTGTATGGGAATGACTTAAGAGGAAAGATTCCTAAGGAACTTGGAAACTTGAAAGCACTTATTAGCATGGATTTGTATGATAACAAGTTGGAGGGGAAAATTCCAAAATCATTTGGCAAGTTGAAGTCATTAAAATTCTTGCGGCTAAACAACAACAAGTTGACAGGATCTATCCCAAGAGAACTCACTCGTCTCAAAAATCTCAAAATCTTTGATGTTTCTAATAATGAACTTTGTGGAACAATACCAGTAGATGGCAACTTTGGATCCTTTCCAATAAAGAGTTTTGAAAACAACAGACTAAGCGGTCCGGAGCTGAAAGGACTTGTTCCGTACGATTTTGGATGCTGA 648 0.3935 MAPLIMIPLSLLFLLLLQFPFQTISINSEGNTLHALKIRLSDPNNVLQSWDPTLVNPCTWFHVTCDINNHVTRLDLGNANVSGTLGSELGHLHHLQYLELYGNDLRGKIPKELGNLKALISMDLYDNKLEGKIPKSFGKLKSLKFLRLNNNKLTGSIPRELTRLKNLKIFDVSNNELCGTIPVDGNFGSFPIKSFENNRLSGPELKGLVPYDFGC* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0472 215 SUPERFAMILY L domain-like 32 203 - -
Tpr1g0472 215 Gene3D Ribonuclease Inhibitor 25 207 IPR032675 -
Tpr1g0472 215 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 12 212 - -
Tpr1g0472 215 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Tpr1g0472 215 Pfam Leucine rich repeat 121 177 IPR001611 GO:0005515
Tpr1g0472 215 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 12 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0472 Tpr-Chr1 3983808 3986279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0472 4 203 Receptor kinase-like Gene Family AT1G71830 57.214 4.57e-67 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0472 - - gmx:100816279 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0472 1 3983808 3986279 Tpr1g0472 1 3983808 3986279 ECH
Tpr2g6073 2 73838915 73840993 Tpr1g0472 1 3983808 3986279 PCT