Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0465 ATGGCCGTCGATATCCTAACCTTAGAAAACAGGTATATTGATTCTTGCAGGAGACATGGTGTTTTGCCTAACGCTGCTATTTTGTCAAGCTTTTTCAAGGCGGAGGTAAAAAAATCCCACCAAGAGCCATGCATCCTGGACATTTTAATTGACGACCTTAAGGATATTGATTTTGCTCCACTCCTTGAGATATGCACGAATCTTGATACTTCTGAAATAGAAGCTGTTGATATACGTAATGAATCAGCATGTGTATTAAGTGAAGAATATGCATTACCATTGATGCGTGCTATTAAACAAAAGCTTCGAGTAGTCGAACTACAGGATGCGTCATTTACAAAAGACTTCATACGGGATATCTCAGAAAGAGGTTTGGCATGCCAAGTTTTGACATCGAGGTCTTGGCGTTTCCGGAAGTTGGGCTTGGTGGGGGAGTTCAGGCATATGCACACACTTAATCTTGATTTCAGTTCCTCCCTTACCAGTTTTGAAGAAGACTGCTTTAATTGCATGCCCAATCTAATGTCTCTCTCAATGTGTGAAACAATGGTTGCAAATCTTTGGTCAACTGTTGCAGCTCTCTCTAAGCTTCCATCTTTGGTTGAACTAAGGTTTCAATATTGGCAGTATTGTAATGATACGGGAACATCTTTTACCTCATCCAGTGGGAAGTCAGATGGCACTGCTGATTTTAGTTTACTTGATAGAGTTCCTTTTATTGGTGAATCCTGCTATGATACAAGGGAACTAACAGATCTTGACATTAGTGTCGAGGATCCACTTAGAAATTTTTATTCCTTTGATGAAGAAGTTATGAGTCATGATGTTCAAAGCATGGTTGAGGACTCAACAGAAAGCATGGTTGAGGACTCATCAGATGATAGTGAAATTGATTTGACAAATCATCATCATAGAAACTGGTTGTTAGATGTTTTTCCTAGGTGGAGTTTACAAATGCCTCTTCAGAGCGAGAATGAAGAGTCATCAAGAGGATCCTTTACAGGGAATGGTATTGATGTTTCCATGAAGTATATGTCTTGTCATGCATCACCAATATGTAAGGAAAAACATTACAGAGAATTCATGATAGCTTCATTACCTAATCTGAAAAGTTTAGATAATCTGCCTATCAGAAATATTGATAAGGAAAGGGCTACTGGAATATTTTATCAATACTTTGAATATCTTCCATACAGATGGAAGAGCAAAGAGAGTGTTTTAAGTATCTTACACAAGCGAGAAATAAAATCAGGCCGCATTAAGGTGCAATCTTCAAACCGTAGCCCTTCACATCCTCATGGAACGTCTCAACATTTTTATACTAGGTCTCTTTCTGCTGCTAAACTGGGGTCTTCGACTTGGCCTTTCTTACATCCCCTTTCCCTATCAGGATTTGAATCGGATAAGGGCTTTCGTCCAAGGCAGTTCGAGTATCACCCATCTGACTCCAGTTTGATGGTCTTTGGAACTCTAGATGGTGAAGTAGTTGTCATCAATCATGAGAGTGAACGCATTGTGAGTTATATCCCATCACTTGGCGCAATGAATAGTGTCTTGGGTCTTTGTTGGCTCAAGAAATATCCTTCCAAGCTTATAGCAGGTTCAGATAACGGTACCCTGAAATTGTATGACATCAACCATATACCAAGACAAATTACTGGCTTATATGGGAACTCTGCTTGTGTTACCTTTGATGAATTTGACAGCCTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTATTCAAGAAATGTTGCTTTGTATGACATCAACAGTGGAAAACGCTTACAAGTGTTCACAGATATGCATCATGGGCATATTAATGTAGTCAAGTTTGCAAATCATTCCCCGTCAATTTTTGCTACTTCATCATTTGATCAGGATGTCAAGATGTGGGACTTGAGACAGAAACCAGTAAACCCTTGCTTCACTGCTTCGAGCTCTAGAGGAAATGTGATGGTTTGTTTTTCTCCAGATGACCAATATATCCTAGCATCGGCAGTTGATAATGAGGTTAGACAATTTATGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCAACTAAAAGTTGTCAAAATTATACTCGTTCTTATTACATGAACGGGAGGGACTACATTATAAGTGGAAGTTGTGATGAACACATTGTCCGTATTTGTTGTGCTCAAACAGGGAGGCGCCTTAGAGATATTTCTCTTGAGGGTAAAAGTTTAGGAAGTTCCATGTTTGTTCAATCTTTGAGAGGCGATCCTTTTAGGGATTTCAATATGAGTGTGTTAGCAGCCTACGTGCGGCCTGGCTCCAAGTCTGAAATTGTCAAGATCAATTTACTAGCATCTAGTGACCATGCCAAGGGCGACTCTGATGCTCATCCTGTATGCCCATCCCACATCATGGGAGCTTGA 2430 0.3984 MAVDILTLENRYIDSCRRHGVLPNAAILSSFFKAEVKKSHQEPCILDILIDDLKDIDFAPLLEICTNLDTSEIEAVDIRNESACVLSEEYALPLMRAIKQKLRVVELQDASFTKDFIRDISERGLACQVLTSRSWRFRKLGLVGEFRHMHTLNLDFSSSLTSFEEDCFNCMPNLMSLSMCETMVANLWSTVAALSKLPSLVELRFQYWQYCNDTGTSFTSSSGKSDGTADFSLLDRVPFIGESCYDTRELTDLDISVEDPLRNFYSFDEEVMSHDVQSMVEDSTESMVEDSSDDSEIDLTNHHHRNWLLDVFPRWSLQMPLQSENEESSRGSFTGNGIDVSMKYMSCHASPICKEKHYREFMIASLPNLKSLDNLPIRNIDKERATGIFYQYFEYLPYRWKSKESVLSILHKREIKSGRIKVQSSNRSPSHPHGTSQHFYTRSLSAAKLGSSTWPFLHPLSLSGFESDKGFRPRQFEYHPSDSSLMVFGTLDGEVVVINHESERIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGTLKLYDINHIPRQITGLYGNSACVTFDEFDSLTSVHVNSTDELFLASGYSRNVALYDINSGKRLQVFTDMHHGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPVNPCFTASSSRGNVMVCFSPDDQYILASAVDNEVRQFMAVDGRLHLVFDIAPTKSCQNYTRSYYMNGRDYIISGSCDEHIVRICCAQTGRRLRDISLEGKSLGSSMFVQSLRGDPFRDFNMSVLAAYVRPGSKSEIVKINLLASSDHAKGDSDAHPVCPSHIMGA* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0465 809 SMART LRRcap_2 355 373 IPR003603 -
Tpr1g0465 809 Pfam WD domain, G-beta repeat 605 639 IPR001680 GO:0005515
Tpr1g0465 809 Gene3D Ribonuclease Inhibitor 93 226 IPR032675 -
Tpr1g0465 809 SUPERFAMILY WD40 repeat-like 472 739 IPR036322 GO:0005515
Tpr1g0465 809 Gene3D Ribonuclease Inhibitor 334 393 IPR032675 -
Tpr1g0465 809 SUPERFAMILY RNI-like 91 217 - -
Tpr1g0465 809 Gene3D - 469 757 IPR015943 GO:0005515
Tpr1g0465 809 ProSiteProfiles Trp-Asp (WD) repeats profile. 606 641 IPR001680 GO:0005515
Tpr1g0465 809 SMART WD40_4 557 595 IPR001680 GO:0005515
Tpr1g0465 809 SMART WD40_4 598 639 IPR001680 GO:0005515
Tpr1g0465 809 SMART WD40_4 644 682 IPR001680 GO:0005515
Tpr1g0465 809 SMART WD40_4 502 544 IPR001680 GO:0005515
Tpr1g0465 809 PANTHER BNAC09G30780D PROTEIN 2 794 IPR046377 GO:0071493|GO:0080008
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0465 525 724 Miscellaneous Gene Families AT5G08390 25.123 2.76e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0465 - - gmx:100806443 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0465 1 3901223 3909480 Tpr1g0465 1 3901223 3909480 ECH