Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0460 ATGGCAACCCTTCCCTCCATCTTCTCCATCTCCTCCTCTTCTCTTCCTCTCCATCGCTTCCGTCCTTCAATTTCCCTCTCTTTCTCTCCTCTCACCCTCCGCTCAAACCCTACAAAATCTCAATCTCGTTCCCCCTTTCTCGTTCTCGCTTCTTCAACTCACCACTCCTTCGACGACTTCACCTCCAAGAAATCGGCTCTTTCGGAGTTGATACAAGAAATTGAACCTTTAGATGTGAGTTACATTCAGAAAGATGTTCCACCAACTACAGCAGATGCTATGAAAAGGACTATTTCTGGTATGCTTGGTTTGCTTCCATCTGATCAATTTACTGTCATTGTTGAGGCCTTGTGGGAACCACTTTCCAAGTTACTCATTTCTTCAATCATGACTGGGTATACATTGCGAAATGCAGAATATAGGCTTTGTCTGGAGAAAACTCTTGACATTTGTGAAAGAGATCTTGAGAAGCCGAAGGCAGAAACTGCTAAGTTTGACTTACAAGACTTCCTACGTGACAGTGTAAATGTTATTGACTTTGGTAGAAAGAATAATTTGTCTCCCAAAGTTGAAAAGTCCCACGACCACATCGATATTGAAGACCTTGGTCAAATATCCGCCGAAGCTCAAGAATATATCTCCAATCTGCAATCTCGCTTGTCTTCCATGAAAAAGGAGCTACGTGAAGTGAAGAGGAAAAGTGCCGCTCTTCAAATGCAACAGTTTGTTGGAGAAGAAAAGAATGATTTGCTGGATTACTTGAGATCGCTTCAGCCAGAACAGGTAGCTCAGCTATCAGAATTTACATCCCCCGAGCTTAAGGACATCATCCTATCTGTCGTCCACGGTCTCCTTGCTACCCTTTCTCCTAAGATGCATTCTAAACCCTCAACTACATCAGAGAATGCAACAGTTGGAACAGCAAATGCTGGTAATGAGGACTGTGCTGAGGTTGTTGAGAATTCTTCACTTCAATTTCAGCCTTTTATTTCATTAACTCGGGATTATCTTGCCCGCCTGCTATTTTGGTGCATGCTGCTGGGACACTATCTTAGAGGCCTTGAGTACCGAATGGAATTGATGGAACTGCTATCCTTGTCAAGTGACACTGAGAATGGCGCTTCTGGGAACGAACAAATTGCTTGA 1146 0.4346 MATLPSIFSISSSSLPLHRFRPSISLSFSPLTLRSNPTKSQSRSPFLVLASSTHHSFDDFTSKKSALSELIQEIEPLDVSYIQKDVPPTTADAMKRTISGMLGLLPSDQFTVIVEALWEPLSKLLISSIMTGYTLRNAEYRLCLEKTLDICERDLEKPKAETAKFDLQDFLRDSVNVIDFGRKNNLSPKVEKSHDHIDIEDLGQISAEAQEYISNLQSRLSSMKKELREVKRKSAALQMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKDIILSVVHGLLATLSPKMHSKPSTTSENATVGTANAGNEDCAEVVENSSLQFQPFISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLSSDTENGASGNEQIA* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0460 381 Coils Coil 206 240 - -
Tpr1g0460 381 PANTHER MAR-BINDING FILAMENT-LIKE PROTEIN 33 378 - -
Tpr1g0460 381 Pfam Protein of unknown function (DUF760) 67 148 IPR008479 -
Tpr1g0460 381 Pfam Protein of unknown function (DUF760) 249 364 IPR008479 -
Tpr1g0460 381 PANTHER OS02G0833400 PROTEIN 33 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0460 Tpr-Chr1 3872287 3875473 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0460 - - gmx:547534 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0460 1 3872287 3875473 Tpr1g0460 1 3872287 3875473 ECH