Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0451 ATGGAAGATGAAAAATGGGTTCTGGTGTGCGGCTCTTCACAGAAGGATTTGTGGAAACCAAGTTTACCAAATGCTGATGATGAACCTTCAAGGCCCTTGAAGGTTGCCTTTTCTGAGCCTGCAGAGTACTGGACTGACGCCATTCCCATTGGAAATGGCCGTCTTGGGGCCATGATTTGGGGTGGTGTACAATCAGAAGTTCTACAGCTCAATGAGGACACACTTTGGACTGGAATACCTGGCAACTACACCGATAAAAATGCTCCTGAAGCTCTGGCTGTAGTCCGAAAACTTGTTGATGACAGAAAATATTCAGATGCTTCAATAGCAGCTAAGAAATTGACAGGAGGTCCTACTGATGTATACCAACCTCTTGGTGATATTAAATTAGAATTTGATGATTCTCATCTGAAATATTCGGAAGAGTCTTATCACAGGGAGCTTGATTTGGATATTGCAACAGCAAAAATAAAATACAACGTGGGTGATGCAGAATTTACCAGAGAGCATTTTGCTTCTAATCCAGACCAAGTGCTAGTGACAAAGTTTTCCACAAGCAAGTCAGGGTCGTTATCATTTACAGTATCTTTGGAGAGCCAATTAGATCACAATTCACGGGTAAGCGGCCTAAATCAGATAATAATGGAAGGAAGCTGTCGTGGCAAAAGGCCGCCAGAAGTGAATTCTAGTGACAAATCAAAAGGAATTAAGTTTTCTGCAGTTCTTGATATACAGATTAGTAATGAAAAAGGGTTTATACATGTTTTGGATGAAAAGAAGCTTAGAGTTGAAAGTTCAGATTGGGCTATTTTGCTTCTGACAGCTTCCTCATCTTTTGATGGTCCATTTACCAAGCCTGAAGACTCCAAAAAAGATCCCACTTCCGAGTCCTTGAGTAAAATGAAGTCTGCCAAAAGTTTTTCATATGATGATATTTACGCACGTCACTTGGATGACTATCAGAATCTATTTCATCGGGTCTCATTGCAACTCTCTAAAAGTTCCAAGACTGTTTTAGGAAAACCTATTTTGGATGAAAGGAAATTGGTTTCCTGTCAAACTAACATCTCTCAAATTGGAGGTGATAATGTTGCTCCAACTTCATCAAGAATCAAATCATTTCAAAATGATGAAGACCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTCTTAATTGCTTGTTCACGTCCTGGAACTCAGGTGGCAAACCTACAGGGTATATGGAACAACGATGTTACACCTGCATGGGATTGTGCTCCGCACTTGAACATAAATCTTCAAATGAACTATTGGCCGTCCCTGTCAAACAACCTACATGAGTGTCAGGAGCCACTATTTGATCACATTTCCGCTTTGTCTGTCAATGGTAGTAAAACAGCGAAGGTGAATTATGAAGCCAATGGTTGGGTTACACATCATGTTTCTGACTTATGGGCTAAAACATCCCCATATGAAGAAGATCCTGTTTGGGCTGTATGGCCAATGGGTGGAGCTTGGCTTTGTACCCATCTATGGGAGCATTACACTTATACAATGGACAAGGAATTTCTTAAAAATCAAGCATATCCTTTGTTGGAAGGATGTGCGTCATTTTTGGTGGATTGGTTGATCGAAGGCTCTGGTGGATTTTTGGAAACTAACCCATCAACTTCACCAGAGCACAAGTTCATTGCACCAGATCAAAAGCAAGCTAGTGTGAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTTTTCTCTATAATCATTTCTGCTGCTGAGGTTTTGGGAAGGCATGATGATGCTATTATTAAAAGAGTAACTGAATCACAGTCTAAGCTTCCTCCTATAAAAATTGCTAGGGATGGGTCCATTCTGGAATGGGCTGAAGATTTTCAGGACCCAGAAACACATCATCGACATGTTTCGCATCTGTTTGGCTTGTTTCCAGGGCACACAATAAGTCTTGAGAAAAATCCAGATCTCTGTAAAGCTGTGGGTTATAGTCTAATGAAAAGAGGAGAAAATGGTCCTGGGTGGTCAACAACTTGGAAAGCTGCATTATGGGCTCATCTTCACAACAGCGAGCATGCATATCGCATGATAAAACACTTGATTATCCTGGCAGACCCTGCTAAGAGTACAGTAGCATTTGAAGGAGGACTTTACAGTAACCTATTCACAGCACATCCTCCTTTCCAAATTGATGCAAACTTTGGTTTTTCAGCAGCAATTGCAGAGATGCTTGTTCAAAGCACAACCAAGGACCTCTACTTACTTCCTGCGTTGCCTCGGGATAAATGGGCAAATGGTTGTGTGAAAGGATTAAAAGCGCGTGGCGGGGTGACGGTCAACATCTGCTGGAAAGAAGGTGATCTGCATGAAGTTGGCCTTTGGTCACAAAATCAGAATTCCAGCATTAGACTACATTTTAAAGGGAACAAGGTTGTGGCAAATTTATCACCAGGAAAAGTTTACTCATATAATAAATGGTTGAAGTGTGTTAAGACATACTCCCTTAGCGAAGTCAATCCCTAA 2532 0.4103 MEDEKWVLVCGSSQKDLWKPSLPNADDEPSRPLKVAFSEPAEYWTDAIPIGNGRLGAMIWGGVQSEVLQLNEDTLWTGIPGNYTDKNAPEALAVVRKLVDDRKYSDASIAAKKLTGGPTDVYQPLGDIKLEFDDSHLKYSEESYHRELDLDIATAKIKYNVGDAEFTREHFASNPDQVLVTKFSTSKSGSLSFTVSLESQLDHNSRVSGLNQIIMEGSCRGKRPPEVNSSDKSKGIKFSAVLDIQISNEKGFIHVLDEKKLRVESSDWAILLLTASSSFDGPFTKPEDSKKDPTSESLSKMKSAKSFSYDDIYARHLDDYQNLFHRVSLQLSKSSKTVLGKPILDERKLVSCQTNISQIGGDNVAPTSSRIKSFQNDEDPSFVELLFQYGRYLLIACSRPGTQVANLQGIWNNDVTPAWDCAPHLNINLQMNYWPSLSNNLHECQEPLFDHISALSVNGSKTAKVNYEANGWVTHHVSDLWAKTSPYEEDPVWAVWPMGGAWLCTHLWEHYTYTMDKEFLKNQAYPLLEGCASFLVDWLIEGSGGFLETNPSTSPEHKFIAPDQKQASVSYSSTMDISIIKEVFSIIISAAEVLGRHDDAIIKRVTESQSKLPPIKIARDGSILEWAEDFQDPETHHRHVSHLFGLFPGHTISLEKNPDLCKAVGYSLMKRGENGPGWSTTWKAALWAHLHNSEHAYRMIKHLIILADPAKSTVAFEGGLYSNLFTAHPPFQIDANFGFSAAIAEMLVQSTTKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGDLHEVGLWSQNQNSSIRLHFKGNKVVANLSPGKVYSYNKWLKCVKTYSLSEVNP* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0451 843 PIRSF UCP007663 8 837 IPR016518 GO:0004560
Tpr1g0451 843 Gene3D - 268 747 IPR012341 GO:0005975
Tpr1g0451 843 PANTHER ALPHA-L-FUCOSIDASE 2 1 841 - -
Tpr1g0451 843 Pfam Glycosyl hydrolase family 65, N-terminal domain 37 281 IPR027414 -
Tpr1g0451 843 PANTHER - 1 841 - -
Tpr1g0451 843 SUPERFAMILY Six-hairpin glycosidases 291 796 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0451 Tpr-Chr1 3805545 3811045 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0451 K15923 - gmx:100808977 1377.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0451 1 3805545 3811045 Tpr1g0451 1 3805545 3811045 ECH