Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0435 ATGGAAAAGAGTGCAGTGTTGACGACTAAACTTTTTGCCATAACCATCTCCATACTCTCATTCGTAAACACCGCTCTCGCCTTCGACGGCGGAAGCACCGATCCTAAACCGCAACCAACTCTCTGTGATGAACTCATTCTCCCCGCCGGTTACCCTTGCTCCGAATATGTGGTTCAAACAAAGGATGGTTTCTTGTTAGGTCTTCAGCGTGTGTCTTCTTCTTCTTCGGCGCGTATTAAGAATGGTCGAGAACGAGGACCTCCGGTTCTGCTTCTGCATGGTCTATTCATGGCGGGTGATGCATGGTTTCTAAATACACCAGAACAATCATTGGGATTCATCCTTGCGGATCATGGTTTTGATGTTTGGGTAGGAAATGTGCGCGGAACACGTTGGAGCCATGGGCATATATCTTTATCAGAGAAAAATAAGAATTTTTGGGATTGGAGCTGGCAGGAATTAGCCCTATATGATCTTGCAGAAATGATCAATTATATTAATTCAGTGACAAACTCAAAGCTATTTGTAGTTGGGCATTCGCAGGGGACAATTATATCTTTTGCTGCCTTCACTCAACCAGAGATAGTGGAAAAGGTTGAAGCTGCAGCTCTTCTTTCTCCAATATCCTACTTGGATCATGTTAGTGCACCTTTGGTACAAAGAATGGTAAAGATGCACCTTGATCAGATGATTGTTACAATGGGAGTTCATCAACTGAATTTCAAAAGCGAATGGGGAGCCAGTCTCTTGGTTTCCTTATGTGATACTCGTCTAAGTTGCAGTGACATGCTGTCATCCATTACAGGGAAGAATTGTTGCTTCAATGAGTCACGTGTGGCTTATTATCTTGAACAAGAACCTCACCCATCATCCTCCAAAAACTTGAACCACCTTTTCCAGATGATACGCAAAGGAACTTTCTCCAAGTATGATTATGGAAAGCTTAAAAATCTGATAGAGTATGGCAATTTCAAACCACCAAAGTTCGACCTTAGTCGCATACCCAAATCATTGCCTTTGTGGATGGCTTATGGGGGAAATGATGCTTTAGCAGATATAACTGATTTCCAGCACACACTGAAAGAACTTCCATCCACACCGGAGGTGGTTTATCTTGAAAACTATGGTCATGTTGACTTCATTTTAAGCTTGCAAGCAAAACAAGATCTTTATGACCCTATCATCAGTTTTTTCAAGTCAATGGGGAAATTTAGTAGTATTTAA 1224 0.4191 MEKSAVLTTKLFAITISILSFVNTALAFDGGSTDPKPQPTLCDELILPAGYPCSEYVVQTKDGFLLGLQRVSSSSSARIKNGRERGPPVLLLHGLFMAGDAWFLNTPEQSLGFILADHGFDVWVGNVRGTRWSHGHISLSEKNKNFWDWSWQELALYDLAEMINYINSVTNSKLFVVGHSQGTIISFAAFTQPEIVEKVEAAALLSPISYLDHVSAPLVQRMVKMHLDQMIVTMGVHQLNFKSEWGASLLVSLCDTRLSCSDMLSSITGKNCCFNESRVAYYLEQEPHPSSSKNLNHLFQMIRKGTFSKYDYGKLKNLIEYGNFKPPKFDLSRIPKSLPLWMAYGGNDALADITDFQHTLKELPSTPEVVYLENYGHVDFILSLQAKQDLYDPIISFFKSMGKFSSI* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0435 407 PANTHER LYSOSOMAL ACID LIPASE-RELATED 27 401 - -
Tpr1g0435 407 SUPERFAMILY alpha/beta-Hydrolases 44 399 IPR029058 -
Tpr1g0435 407 Pfam Serine aminopeptidase, S33 111 242 IPR022742 -
Tpr1g0435 407 Gene3D alpha/beta hydrolase 32 400 IPR029058 -
Tpr1g0435 407 PANTHER TRIACYLGLYCEROL LIPASE 1 27 401 - -
Tpr1g0435 407 PIRSF Steryl_ester_lip 3 403 IPR025483 GO:0016788
Tpr1g0435 407 Pfam Partial alpha/beta-hydrolase lipase region 44 106 IPR006693 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0435 Tpr-Chr1 3697737 3702210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0435 37 406 Acyl Lipid Metabolism Gene Families AT2G15230 64.595 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0435 K01052 - gmx:100803830 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0435 1 3697737 3702210 Tpr1g0435 1 3697737 3702210 ECH