Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0430 ATGGGATCCAAAACTCCCACTCACATTCTTCTCGTCTCTTATCCATTACAAGGACACATAAATCCACTTCTTAGATTAGCAAAATGTCTTGCTGCAAAGGGTTCTTCTGTCATCTTCATAACAACAGAAAAAGCTGGCAAAGACATGAAAACTGTTAACAACATCACTGATAAATCAGCCACTCCAATAGGTGAAGGTTCTCTCACTTTTGAGTTCTTTGATGATGGTTTAGAACATGATGATCCCATTAAAAATGATCTAGGTGGCTATTCAGAACAACTTGAACTAGTTGGAAAACAATTTCTTTCTCAAATGATTAAGAATCATGCTGACTCAAACAAACCAGTTTCATGTATCATAAACAATCCATTTTTTCCATGGGTTTGTGATGTAGCTTATGAACATAATATTCCTTCTGCTTTATTATGGATTCAATCCACTGCTGTTTTCACTGCTTACTATAATTATTTCCATAAACTGGTACGTTTTCCTTCTGATTCAGAACCTTATATTGATGTTCAACTCAACTCTTCATTAGTTCTTAAACATAATGAAATTCCAGATTTTCTGCATCCTTTAAGTAAATATCAATTTCTTGGTGAACTCATCTTAGGACAGTTTAAGAATTTATCAAAAGCTTTTTGTGTACTTGTTGATTCATTTGAAGAACTAGAACATGATTTCATTGATTATAGTTCAAAAAATTCAATTTTTATGAGACCTATTGGTCCATTGTTCAAGAATCCAATAATCAAAAGTGCAAATATTCGTGGTGATTTTGTTAAGAGTGATGATTGTAATATTGTAGAGTGGCTTAACACAAAACCAAGAGATTCTGTTGTTTATATTTCATTTGGGACTATTGTGTATCTTCCACAAGAACAAGTGAATGAAATTGCATATGGATTATTGGATTCTAAAGTTTCATTTTTGTGGGTAATAAAACCACCTCCTAAGGAAATGGGGCTAAAGGAACATGTTTTACCAAATGGGTTTTTAGAGGAAACAATTGAGAGAGGAAAAGTTGTGAAATGGAGTCCACAAGAAGAAGTACTTGCTCATCCTTCATTGGCATGTTTCATAACACATTGTGGTTGGAATTCATCAATGGAAGCACTTAGTTTAGGTGTACCAATGTTGACATTTCCTGCATGGGGTGATCAAGTTACAAATGCTAAGTTTTTGGTTGATGTTTTTGGTGTAGGTATTAGATTGGGTTATGGTTTTATGGAAAACAAATTGATAACAAGAGATGTTGTGAAAAAGTGCTTATTGGAAGCTACAACAGGGGAAAAAGCAGAGGAATTGAAGAAAAATGCAGTGAAATGGAAGAAGGCGGCAGAGAATGCAGTGGCTGACGGTGGATCCTCTGATCGGAATCTTGATGAGTTTATTGAAGACATTAAGAAATGTGGCATTGTTAACATTCACAAGATTTAA 1440 0.3431 MGSKTPTHILLVSYPLQGHINPLLRLAKCLAAKGSSVIFITTEKAGKDMKTVNNITDKSATPIGEGSLTFEFFDDGLEHDDPIKNDLGGYSEQLELVGKQFLSQMIKNHADSNKPVSCIINNPFFPWVCDVAYEHNIPSALLWIQSTAVFTAYYNYFHKLVRFPSDSEPYIDVQLNSSLVLKHNEIPDFLHPLSKYQFLGELILGQFKNLSKAFCVLVDSFEELEHDFIDYSSKNSIFMRPIGPLFKNPIIKSANIRGDFVKSDDCNIVEWLNTKPRDSVVYISFGTIVYLPQEQVNEIAYGLLDSKVSFLWVIKPPPKEMGLKEHVLPNGFLEETIERGKVVKWSPQEEVLAHPSLACFITHCGWNSSMEALSLGVPMLTFPAWGDQVTNAKFLVDVFGVGIRLGYGFMENKLITRDVVKKCLLEATTGEKAEELKKNAVKWKKAAENAVADGGSSDRNLDEFIEDIKKCGIVNIHKI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0430 479 Coils Coil 433 453 - -
Tpr1g0430 479 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 472 - -
Tpr1g0430 479 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 6 472 - -
Tpr1g0430 479 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Tpr1g0430 479 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 259 410 IPR002213 GO:0008194
Tpr1g0430 479 CDD GT1_Gtf-like 8 468 IPR002213 GO:0008194
Tpr1g0430 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 470 - -
Tpr1g0430 479 Gene3D Glycogen Phosphorylase B; 12 461 - -
Tpr1g0430 479 Gene3D Glycogen Phosphorylase B; 255 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0430 Tpr-Chr1 3663864 3665416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0430 3 468 Glycosyltransferase AT4G15480 53.319 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0430 - K23279 gmx:100804361 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0430 1 3663864 3665416 Tpr1g0430 1 3663864 3665416 ECH