Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0428 ATGTCTTTAGAGAACAAAACAATCAAACCAGAAATTCATGTTCTATTAGTAGCTTTTTCAGCCCAAGGTCACATAAACCCATTACTTAGATTAGGCAAATCACTATTAACCAAAGGCTTTAATGTCACACTTGCCACCACTGAATTAGTCTACCACCGTGTCTTTAAATCAACCACCACTTCAACCACCGCCGACAACGCCGTCCCCGCCTCTTACACCACCAATGGAATCAATGTTCTGTTTTTCTCCGACGGCTTCGACATAACCCAAGGTAATAAATCTCCTGATGAATACATGGACCTCATTGCTGAATTTGGACCCATTAGTCTAACAAATCTCATCAAAAACAATTTCCTTAACAACACTAACAAAAAACTAGCTTGCATTATCAACAATCCATTTGTTCCTTGGGTAACAAATGTTGCTTCTGAATTCAATATCCCATGTGCATGTCTTTGGATTCAACCTTGTACTCTTTACTCTATATACTATCGTTTCTACAACAAATTGAACCAATTTCCAACCCTAGAAAACCCCGAAATCGATGTCGAATTACCCGGTCTTCCGTTGTTGAAACCACAAGACCTACCATCTTTTGTTCTTCCATCAAATCCTTTTGGAGCATTATCAAATGTCTTAGCTGAAATGTTCCAAGACATGAAGAAACTAAAATGGGTGTTAGCAAATTCTTTCTATGAATTGGAAAAAGATGTGATTGATTCAATGGCTGAGATTTTCCCAATCAAAACTGTTGGTCCATTGGTTCCACCATCATTACTTGGTCAAGATCAAACACAAGATGTTGGAATTGAAATGTGGAAATCACAAGATTCATGCATTGAATGGCTTAACCAAAAACCACCATCATCAGTTATATATATCTCATTTGGAAGTCTCATTTTTTTATCAGAAAAACAAATGCAGAGCATAGCAGAAGCATTGAAGAATAGTAAAAGATATTTTCTTTGGGTGATGAAGAGTAAAGAAGGAGAAGCTCCAGTTACACTTCCTGAGAAATTCTTAGTAGAAACAAAAGAAAAAGGAATGGTTGTGTCTTGGTGTCCACAAACACAGGTTTTGGTTCATCCTGCAATAGCATGTTTCTTAACACATTGTGGTTGGAATTCAATGTTGGAAGCAATAACAGCAGGAGTACCTATGATTGCATATCCACAATGGACTGATCAACCAACAAATGCAAAACTTGTTTCTGATATTTTCGGTATGGGGATTCGGTTGAAACAGGACAGTGATGGTTTTGTTAAGAGTGAAGAAGTTGAAAGAGCTATTGGTGAGATTGTTGGAGAAAGATTTGATGTGTTTAAGAAAAATGCAGTGGAACTTAAAGTTGCGGCGAGGGAAGCGGTGGCTGATGGTGGCTCTTCTGATCGGAATATTCAAGAATTTGTTGATGAAATTCTTGCTAGTGTAGTGGATGATAATTGA 1446 0.3762 MSLENKTIKPEIHVLLVAFSAQGHINPLLRLGKSLLTKGFNVTLATTELVYHRVFKSTTTSTTADNAVPASYTTNGINVLFFSDGFDITQGNKSPDEYMDLIAEFGPISLTNLIKNNFLNNTNKKLACIINNPFVPWVTNVASEFNIPCACLWIQPCTLYSIYYRFYNKLNQFPTLENPEIDVELPGLPLLKPQDLPSFVLPSNPFGALSNVLAEMFQDMKKLKWVLANSFYELEKDVIDSMAEIFPIKTVGPLVPPSLLGQDQTQDVGIEMWKSQDSCIEWLNQKPPSSVIYISFGSLIFLSEKQMQSIAEALKNSKRYFLWVMKSKEGEAPVTLPEKFLVETKEKGMVVSWCPQTQVLVHPAIACFLTHCGWNSMLEAITAGVPMIAYPQWTDQPTNAKLVSDIFGMGIRLKQDSDGFVKSEEVERAIGEIVGERFDVFKKNAVELKVAAREAVADGGSSDRNIQEFVDEILASVVDDN* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0428 481 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 11 476 - -
Tpr1g0428 481 Gene3D Glycogen Phosphorylase B; 17 466 - -
Tpr1g0428 481 CDD GT1_Gtf-like 13 455 IPR002213 GO:0008194
Tpr1g0428 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 287 448 IPR002213 GO:0008194
Tpr1g0428 481 Gene3D Glycogen Phosphorylase B; 267 454 - -
Tpr1g0428 481 PANTHER GLYCOSYLTRANSFERASE-RELATED 11 476 - -
Tpr1g0428 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 474 - -
Tpr1g0428 481 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0428 Tpr-Chr1 3652341 3654183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0428 11 473 Glycosyltransferase AT2G23260 44.374 1.60e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0428 K13692 - gmx:100778995 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0428 1 3652341 3654183 Tpr1g0428 1 3652341 3654183 ECH