Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0424 ATGGTTGAACCTAACCGCATTTCCGTTCATCACGTTCTCGGCGCTGGCTTAGTTGCCGATGTGTTGCTATGGAAGAATTGGCGCGGCGGAGTTGCGGTGCTGAGTTCTGCAACCACATTGTGGTATCTGTTTGAATGTGCCGGTTACAATTTCTTGTCGTTTGTGGCAAATGTGATATTGCTTCTCGTCGTGATTCTGTTTCTATGGGCTAAAGCTGCTAATCTTCTTAATAGACCTCTTCCTCCTCTGCCTGATCTGGAGATCTCGGAGGAAACTATTGCGAAGCATGCTGAAGTGCTGCAAATTTGGATAAATCGGGCTTTGTCTGTTGCACATGATATAGCAATCGAGAGGGATTTGTTTCTTTGTCTACAGGTTGTTGGTGTATTGTGGACAATATCTTATATTGGTAGTCTGTTTAACTTCTTGACTTTGATCTATATATGTGTTCTTCTTAGCTTGTCACTTCCTGTGTTGTATGACAAGTACCAGGATCGAATTGATGAGAAGCTTCATGTGGTACATGGGGTTATTCACCCACATTATCAAAAGATTTGCAACATTGTCTTGAGCATTATTCCAAAACGTACAAGCAAAGAAAAGAAGGTGCAATAG 615 0.4211 MVEPNRISVHHVLGAGLVADVLLWKNWRGGVAVLSSATTLWYLFECAGYNFLSFVANVILLLVVILFLWAKAANLLNRPLPPLPDLEISEETIAKHAEVLQIWINRALSVAHDIAIERDLFLCLQVVGVLWTISYIGSLFNFLTLIYICVLLSLSLPVLYDKYQDRIDEKLHVVHGVIHPHYQKICNIVLSIIPKRTSKEKKVQ* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0424 204 Pfam Reticulon 18 172 IPR003388 -
Tpr1g0424 204 ProSiteProfiles Reticulon domain profile. 18 204 IPR003388 -
Tpr1g0424 204 PANTHER RETICULON-LIKE PROTEIN B11 5 203 - -
Tpr1g0424 204 PANTHER RETICULON 5 203 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0424 Tpr-Chr1 3614417 3617222 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0424 K20723 - gmx:100527029 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0424 1 3614417 3617222 Tpr1g0424 1 3614417 3617222 ECH