Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0296 ATGAACGGTAGAGATTCTGTTGTTTGCCCTAAGCCCCGCCGTGTCGGACTCTTCAACTTTGCCGTTAACGACCAACCGAGCAGAGCTTTCCGGTGGCATCTCAGCTGCCAAGTTGAACCGTGTGATTCGAACTCATCTGGGTCAAATCCCTTGGATACCATTCTCACCAAGGATGTTAATTGTGATATGGAGCAATTATCGTCGCCGCCCCCATTTTTCTGTGGGTCGCCGCCGAGTAGAGTATCTAACCCTCTAATTCAAGATGCTAGATTTGGGGATGAGAATTTTTCTCCTCTTTCGCCGTCTTCTTGGGTGGTGATCCCCACCCAATCCGGTCTGCCGCCGTCTCCCTCGTCCTCTGGAAGGAAGGGAGGATGTGTTCGGGCCAATTTTGGAAACAATCCGGCAGTGAGAGTTGAAGGATTCGATTGCCTGGACAGGGACAGGCGAAATTGCAGCATCCCTGCACTGGCTTAG 477 0.5178 MNGRDSVVCPKPRRVGLFNFAVNDQPSRAFRWHLSCQVEPCDSNSSGSNPLDTILTKDVNCDMEQLSSPPPFFCGSPPSRVSNPLIQDARFGDENFSPLSPSSWVVIPTQSGLPPSPSSSGRKGGCVRANFGNNPAVRVEGFDCLDRDRRNCSIPALA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0296 158 PANTHER EXPRESSED PROTEIN 4 158 - -
Tpr1g0296 158 PANTHER BNAA07G24630D PROTEIN 4 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0296 Tpr-Chr1 2502470 2504586 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0296 - - cam:101498397 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0296 1 2502470 2504586 Tpr1g0296 1 2502470 2504586 ECH
Tpr1g0296 1 2502470 2504586 Tpr3g0361 3 3884317 3886145 ECH
Tpr1g0296 1 2502470 2504586 Tpr5g0240 5 3472774 3474969 ECH
Tpr1g0296 1 2502470 2504586 Tpr2g0121 2 1654610 1657066 ECH