Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0284 ATGGTCAGTTTTAATATGGAACATTCTGATTCAGAGATTCCTTTTCCTCTTTCTGCCATTACCGAAGCCTTTGAGAATCTCTCTGAAAAGGTTAAGGGAATCAAAAACGGTTCTACCGGACATCTTCGTTTGGACAATTTCTGTGAAATTGCTTCTCTTGTTTCTGTTCTTTTTCGTTGTCTTGGTCTTGCTTTCAAATTTGCTGAAATGGAATACGTTGCTAAGCTGCATGCACTGGTGGATGCATCAAAGACATTTCAGACTTTACAAGATATAATTGACCATGATGTGGCCAATTACACAGTGAAAACATCAGGGAGCAATTCACGTAATCTACGCAGAGTTCGGCAGGGTCTTGATCTCGTTAGAGCTATATTCGAACAACTTTTGTCAACTAGTGATAGTTATCTAAAGGAAGTGGCTTCAACAGCTTATGCAGAGGTCTGTGCACCGTATCACACATGGGCGGTCAGGACGGCTGTTTATGCTGGAATGTATACACTTCCGACAAGAGAACAACTTTTTTTAAAGCTCAATGAAACAGAGCAATCAGCAGAGAAGAAGATGAGAAGATACATTTCTGCTTCACTTCCGATCATAGAATACATCGATAAATTGTACCTTTCTCGAAATATTGTATTGGACTGGTGA 651 0.3978 MVSFNMEHSDSEIPFPLSAITEAFENLSEKVKGIKNGSTGHLRLDNFCEIASLVSVLFRCLGLAFKFAEMEYVAKLHALVDASKTFQTLQDIIDHDVANYTVKTSGSNSRNLRRVRQGLDLVRAIFEQLLSTSDSYLKEVASTAYAEVCAPYHTWAVRTAVYAGMYTLPTREQLFLKLNETEQSAEKKMRRYISASLPIIEYIDKLYLSRNIVLDW* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0284 216 Gene3D Glycolipid transfer protein 8 216 IPR036497 -
Tpr1g0284 216 SUPERFAMILY Glycolipid transfer protein, GLTP 39 213 IPR036497 -
Tpr1g0284 216 Pfam Glycolipid transfer protein (GLTP) 43 180 IPR014830 GO:0005737|GO:0120009|GO:0120013
Tpr1g0284 216 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 14 216 - -
Tpr1g0284 216 PANTHER ACD11 HOMOLOG PROTEIN 14 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0284 Tpr-Chr1 2357016 2359251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0284 16 216 Acyl Lipid Metabolism Gene Families AT4G39670 68.966 5.70e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0284 - - aprc:113872428 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0284 1 2357016 2359251 Tpr1g0284 1 2357016 2359251 ECH